Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 301 a.a., site-specific tyrosine recombinase XerD from Parabacteroides merdae CL09T00C40

 Score = 75.5 bits (184), Expect = 8e-19
 Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 16/181 (8%)

Query: 10  LTKDELKLFIDTVD-----SKEHKLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDT 64
           LT +E+   +DT+D      + ++   ++LY   LRVSEL+++   ++  +EG  K+ + 
Sbjct: 113 LTVNEINSILDTIDLTLPEGQRNRAMLEVLYSCGLRVSELVSLRFTDVYFDEGFIKV-EG 171

Query: 65  KTENFQICVIPEWLNEDIFGHIVDNN---LKD--DDRLFKFK-----NRTYAWELVKKYT 114
           K    ++  I E   ++I  ++ D N   +K   +D LF  +     +R   + ++K+ T
Sbjct: 172 KGSKQRLVPISETAIKEIKNYLYDRNHVAVKKGFEDILFLSRRGTALSRIMVFHIIKQQT 231

Query: 115 KDAKIHKEFSTHTFRRSRALHLLNDGVPLEKVSKYLRHKSINTTMHYLKITVDDIKKELV 174
           + A I K  S HTFR S A HLL  G  L  + + L H+ I TT  Y  I    ++KE++
Sbjct: 232 EMAGIKKNVSPHTFRHSFATHLLEGGANLLAIQEMLGHEKITTTEIYTHIDRQFLRKEIL 291

Query: 175 K 175
           +
Sbjct: 292 E 292