Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 294 a.a., integrase from Pedobacter sp. GW460-11-11-14-LB5

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 10/167 (5%)

Query: 13  DELKLFIDTVDSKEHKLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTKTENFQIC 72
           D    F ++  S    L  ++LYG  +R++ELL ++  +I++  G  K+L  + +   I 
Sbjct: 119 DSEHYFDESFPSVRDHLVIELLYGTGMRLTELLQLKDTDIDIYSGTIKVLGKRNKERIIP 178

Query: 73  VIPEWLNEDIFGHIVDNNLKD--DDRLFKFKNRTYA-------WELVKKYTKDAKIHKEF 123
           V  + +N+ +  +I    L++  ++ L      T A       + +V  Y      +++ 
Sbjct: 179 VNKQLINQ-VNTYIELKKLQNFNNNLLILIVTNTGAAAYPKLIYRIVTSYLNHVSTNEKK 237

Query: 124 STHTFRRSRALHLLNDGVPLEKVSKYLRHKSINTTMHYLKITVDDIK 170
           S H  R S A  LLN G  L  + + L H S+  T  Y   +++ +K
Sbjct: 238 SPHVLRHSYATSLLNAGADLNAIKELLGHASLAATQVYTHNSIERLK 284