Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 304 a.a., tyrosine recombinase XerD from Dechlorosoma suillum PS

 Score = 53.1 bits (126), Expect = 4e-12
 Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 18/161 (11%)

Query: 28  KLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTKTENFQIC---VIPEWL------ 78
           +   ++LY    RVSEL+ + +  +NL+ GV + +    +   +    +  +WL      
Sbjct: 136 RALLEVLYATGFRVSELVGLTLTQLNLDMGVVRTIGKGNKERLVPLGEISSDWLVRYLAE 195

Query: 79  -------NEDIFGHIVDNNLKDDDRLFKFKNRTYAWELVKKYTKDAKIHKE-FSTHTFRR 130
                       G  +  + K D+   +   R  AW L+KKY +   I ++  S H  R 
Sbjct: 196 SRPVLLKGRSSDGLFITGHQKKDNNDARM-TRQMAWLLIKKYGELVGIPRDRISPHVLRH 254

Query: 131 SRALHLLNDGVPLEKVSKYLRHKSINTTMHYLKITVDDIKK 171
           + A HLLN G  L  V   L H  I+TT  Y  +  + +K+
Sbjct: 255 AFATHLLNCGADLRIVQLLLGHADISTTQIYTHVARERLKE 295