Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 198 a.a., resolvase from Marinobacter adhaerens HP15

 Score = 46.2 bits (108), Expect = 4e-10
 Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 18/177 (10%)

Query: 9   WLTKDELKLFIDTVDSKEHKLFFKMLYGMALRVSELLTIE--------------VKNINL 54
           +L K E+   ++      H+L   +++ +  RVSE+LTI               +K I  
Sbjct: 12  YLLKPEVLTLLEAETHPMHRLILDLMWCIGARVSEVLTITPASFIDDGYDFGVVLKTIKQ 71

Query: 55  NEG--VCKLLDTKTENFQICVIPEWLNEDIFGHIVDNNLKDDDRLFKFKNRTYAWELVKK 112
             G    + L    + F I ++       I  ++     + D+R+F    +  +  + + 
Sbjct: 72  GAGRPSKRSLQRSPKRF-IPILDRDFQTRIQSYLWMGKFRQDERIFPITRQAVSANIDRL 130

Query: 113 YTK-DAKIHKEFSTHTFRRSRALHLLNDGVPLEKVSKYLRHKSINTTMHYLKITVDD 168
             +   +   +   HTFR S A+HLL  G PL+ VS+ L H+S+ +T  Y  +   D
Sbjct: 131 IDQVGGEPPFKIGCHTFRHSFAVHLLLYGRPLKFVSQLLGHRSVESTEVYTNVLAFD 187