Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 298 a.a., site-specific tyrosine recombinase XerD from Klebsiella michiganensis M5al

 Score = 55.8 bits (133), Expect = 7e-13
 Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 12/155 (7%)

Query: 28  KLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTKTENFQICVIPE---WLNEDI-- 82
           K   ++LY   LRVSEL+ + + +I+L +GV +++    +   + +  E   W+   +  
Sbjct: 136 KAMLEVLYATGLRVSELVGLTMSDISLRQGVLRVIGKGNKERLVPLGEEAVLWVENYLEY 195

Query: 83  -----FGHIVDNNLKDDDRLFKFKNRTYAWELVKKYTKDAKIHKE-FSTHTFRRSRALHL 136
                   +  + L    R  +   +T+ W  +K Y   A I  E  S H  R + A HL
Sbjct: 196 GRPWLLNGVASDVLFPSQRAQQMTRQTF-WHRIKHYAVLAGIDSEKLSPHVLRHAFATHL 254

Query: 137 LNDGVPLEKVSKYLRHKSINTTMHYLKITVDDIKK 171
           LN G  L  V   L H  ++TT  Y  +  + +++
Sbjct: 255 LNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQ 289