Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 298 a.a., Tyrosine recombinase XerD from Enterobacter sp. TBS_079

 Score = 55.1 bits (131), Expect = 1e-12
 Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 10/154 (6%)

Query: 28  KLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTKTENFQICVIPE---WLNEDI-F 83
           K   ++LY   LRVSEL+ + + +I+L +GV +++    +   + +  E   WL   +  
Sbjct: 136 KAMLELLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEH 195

Query: 84  GHIVDNNLKDDDRLFKFKN-----RTYAWELVKKYTKDAKIHKE-FSTHTFRRSRALHLL 137
           G     N    D LF  +      R   W  +K Y   A I  E  S H  R + A HLL
Sbjct: 196 GRPWLLNGASIDVLFPSQRAQQMTRQTFWHRIKHYATLAGIDSEKLSPHVLRHAFATHLL 255

Query: 138 NDGVPLEKVSKYLRHKSINTTMHYLKITVDDIKK 171
           N G  L  V   L H  ++TT  Y  +  + +++
Sbjct: 256 NHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQ 289