Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 209 a.a., tyrosine-type DNA invertase IpuA from Escherichia coli Nissle 1917

 Score = 46.6 bits (109), Expect = 3e-10
 Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 15/170 (8%)

Query: 7   KDWLTKDELKLFIDTVDSKEHK----LFFKMLYGMALRVSELLTIEVKNINLNEGVCKLL 62
           + +LT  E+ L + +V  K           + Y   LRVSELL++++ ++ L      + 
Sbjct: 4   RKFLTHHEINLLLQSVKQKSCSSRDVCMILLAYFHGLRVSELLSLQLSDLELTTEKIYIQ 63

Query: 63  DTKT--------ENFQICVIPEWLNEDI---FGHIVDNNLKDDDRLFKFKNRTYAWELVK 111
             K         +  ++  I  WLNE       H  DN      R  K  +R   + +V 
Sbjct: 64  RIKNGFSTVHPLQKEEVIAITNWLNERNSLNVKHFNDNPWLFVSRTGKPLSRQRFYNIVS 123

Query: 112 KYTKDAKIHKEFSTHTFRRSRALHLLNDGVPLEKVSKYLRHKSINTTMHY 161
              K+A ++ +   H  R +    L ++GV    +  YL H++I  T+ Y
Sbjct: 124 AAGKNAGLNIKVHPHMLRHACGYSLADNGVDTRLIQDYLGHRNIRHTVIY 173