Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 306 a.a., recombinase XerD from Cupriavidus basilensis FW507-4G11

 Score = 67.0 bits (162), Expect = 3e-16
 Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 15/177 (8%)

Query: 10  LTKDELKLFIDTVDSK-----EHKLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDT 64
           LT+ +++  ++T D+        +   +++Y   LRVSEL  ++   I+LNEGV +++  
Sbjct: 121 LTEAQVEALLETPDTATPLGLRDRTMLELMYASGLRVSELTQMKTIEISLNEGVARVVGG 180

Query: 65  KTENFQICVIP----EWLNEDIF-GHIVDNNLKDDDRLFKFKN-----RTYAWELVKKYT 114
           K    ++        +WL   +  G       +  + LF  +      R   W L+K++ 
Sbjct: 181 KGNKERLVPFGTEAGDWLRRYLAEGRPALLGERACEALFVTQRGEGMTRQAFWHLIKRHA 240

Query: 115 KDAKIHKEFSTHTFRRSRALHLLNDGVPLEKVSKYLRHKSINTTMHYLKITVDDIKK 171
           ++A+I+   S HT R + A HLLN G  L  V   L H  I+TT  Y  +  + +++
Sbjct: 241 REAEIYAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLRE 297