Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 403 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 47.8 bits (112), Expect = 3e-10
 Identities = 25/88 (28%), Positives = 42/88 (47%)

Query: 89  NNLKDDDRLFKFKNRTYAWELVKKYTKDAKIHKEFSTHTFRRSRALHLLNDGVPLEKVSK 148
           N   D+  +F   NR   W  V +        +  + H  R S    L++  +P+E ++K
Sbjct: 302 NTTDDEKPVFPLPNRDALWFEVHELGITIGKEENLTYHQSRHSFGTFLISADIPIESIAK 361

Query: 149 YLRHKSINTTMHYLKITVDDIKKELVKI 176
            + H +I TT  Y +IT D I K++ K+
Sbjct: 362 MMGHSNIRTTQGYARITDDKISKDMDKL 389