Pairwise Alignments

Query, 248 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 260 a.a., Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein from Pseudomonas fluorescens FW300-N2E2

 Score = 82.8 bits (203), Expect = 6e-21
 Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 20/258 (7%)

Query: 1   MKKICFLMAIVLILAISACISLPSEQITIKTGTLSVGVFKHAPP-AVYGQNGELIGFEVE 59
           +K+I   + +V +LA    +            +L +G+    PP A    +  ++GF+ +
Sbjct: 3   VKRIALKLGLVSLLAFGTSLQAAES-------SLRIGIEAAYPPFASKTPDNAIVGFDYD 55

Query: 60  LVSEIAKRMNLNVEFKEYMFSNLLNAVANNEIDCAISDISISPEREKIVSFTRAYSHTEL 119
           +   +   M +   ++E  F  L+ A+   ++D  IS +SI+PER K V FT  Y     
Sbjct: 56  IGQALCAEMKVRCVWQEQEFDGLIPALKVKKVDAVISSMSITPERLKSVDFTDRYYRIPA 115

Query: 120 VVLVRKESGIRTI-TDLNGKKIGVVDDTIHETKAKSLQKSMDFEIIEYETPIELYNDLNN 178
            ++ RK SGI  I   LNGK+IGV   T  +            E++ Y +  E++ DL  
Sbjct: 116 RLVFRKGSGINDIPAQLNGKRIGVQRATNFDRYVTDHFAPAGAEVVRYGSQNEIFLDLLG 175

Query: 179 GKIDATISEM----DNFKVSSYMDQLELID---TLEILYS---GIAVNKNNKELLHEMDR 228
           G++DAT++      ++       +  E +    T E  +    GIAV KN+  L    ++
Sbjct: 176 GRLDATMASSVVIDESLLKRPEGNDFEFVGPNFTEEQYFGTGIGIAVRKND-TLAGRFNQ 234

Query: 229 VLLELETEGYIEELKQKW 246
            L  +   G  E ++QK+
Sbjct: 235 ALATIRANGTYERIRQKY 252