Pairwise Alignments

Query, 248 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 250 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis JJ

 Score =  166 bits (419), Expect = 5e-46
 Identities = 95/248 (38%), Positives = 146/248 (58%), Gaps = 7/248 (2%)

Query: 3   KICFLMAIVLILAISACISLPSEQITIKTGTLSVGVFKHAPPAVYGQNGELIGFEVELVS 62
           KI  +  I LI+  S C    +E        L+VG      P  Y ++GE  GFEVEL+ 
Sbjct: 5   KILIISTIFLII-FSGCTEKNTES---NNRVLNVGACTDLAPTSYLEDGEFKGFEVELIY 60

Query: 63  EIAKRMNLNVEFKEYMFSNLLNAVANNEIDCAISDISISPEREKIVSFTRAYSHTELVVL 122
           EI+KR++L  EF  Y FS LL+AV+   +DC I  I  +PER+  + F+R Y++T   +L
Sbjct: 61  EISKRLDLKPEFIAYSFSELLDAVSEGNVDCGIGYIGRTPERQLKMDFSRQYAYTYSSIL 120

Query: 123 VRKESGIRTITDLNGKKIGVVDDTIHETKAKSLQKSMDFEIIEYETPIELYNDLNNGKID 182
           V++ S    I  L  K +GV+ D+I E   +SL KSMDF+II YE   +++ DL +GKID
Sbjct: 121 VKQNSECVGIKCLEHKSVGVLKDSIEEKWLESLSKSMDFDIISYENQNDIHKDLLSGKID 180

Query: 183 ATISE--MDNFKVSSYMDQLELI-DTLEILYSGIAVNKNNKELLHEMDRVLLELETEGYI 239
           + +++     + +  Y  +L++I D  +I+Y  IA++  N EL   +D  LLE+E +G +
Sbjct: 181 SEVTDHLTSLYLIQKYNSELKIIGDKFDIIYIAIAIDNTNPELKKSIDAALLEMENDGTL 240

Query: 240 EELKQKWS 247
            +LK+KW+
Sbjct: 241 VKLKEKWN 248