Pairwise Alignments

Query, 248 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 246 a.a., amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 82.0 bits (201), Expect = 1e-20
 Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 19/223 (8%)

Query: 38  VFKHA---PPAVY-GQNGELIGFEVELVSEIAKRMNLNVEFKEYMFSNLLNAVANNEIDC 93
           VF H    PP  +   N +++G  V+ V  IAK     V  K   +  +   +A  + D 
Sbjct: 26  VFAHDATWPPMEFVDANKQIVGLAVDYVDAIAKEAGFKVVHKNVAWDGIFAGLAAGKYDA 85

Query: 94  AISDISISPEREKIVSFTRAYSHTELVVLVRKESGIRTITDLNGKKIGVVDDTIHETKAK 153
             S ++I+ ER+K + FT  Y   +  ++V K +  +T+ D+ GK +G     I  T   
Sbjct: 86  IASSVTITEERKKAMDFTMPYFDVKQALVVPKTTEAKTLEDMKGKTLGA---QISTTGHF 142

Query: 154 SLQKSMDFEIIEYETPIELYNDLNNGKIDATISEMDNFKVSSYMDQLE----------LI 203
           +++++       Y+       DL NG+ID  +   D+   ++Y  Q E          ++
Sbjct: 143 AIKRTAGVTAKSYDEIGLAMEDLFNGRIDGVV--CDDPVAANYALQQEEYAKKLKIAFIV 200

Query: 204 DTLEILYSGIAVNKNNKELLHEMDRVLLELETEGYIEELKQKW 246
           DT E  Y GIAV + NKEL+  +++ +  ++ +G   +L+ KW
Sbjct: 201 DTPESEYYGIAVKQGNKELVDLINKGIEAVKAKGIDAQLRAKW 243