Pairwise Alignments

Query, 248 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 273 a.a., amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 83.2 bits (204), Expect = 5e-21
 Identities = 57/258 (22%), Positives = 126/258 (48%), Gaps = 15/258 (5%)

Query: 4   ICFLMAIVLILAISACISLPSE---------QITIKTGTLSVGVFKHAPPAVYGQNGELI 54
           I  L+ +++ +++++    P           +  +K GTL VG     P A+  ++G  +
Sbjct: 5   IMTLLGVLMAISVASAADRPLRDQLAEDSVIEQALKRGTLRVGFSTFVPWAMQDKSGAFV 64

Query: 55  GFEVELVSEIAKRMNLNVEFKEYMFSNLLNAVANNEIDCAISDISISPEREKIVSFTRAY 114
           GFEV++ + +A+ + LN+E     +S ++ A+   + D  I  +S+ P R   V+FT  Y
Sbjct: 65  GFEVDVATRLAQDLGLNLELVPTKWSGIIPALLTGKFDVIIGGMSVKPVRSLKVNFTIPY 124

Query: 115 SHTELVVLVRKE--SGIRTITDLNGKKIGVVDDTIHETKAKSLQKSMDFEIIEYETPIEL 172
            +  + V+  K   +G++++ D +  ++ VV  T       + ++     +  ++     
Sbjct: 125 DYASISVMASKSAAAGLKSLDDFDNPEVVVVARTGSTAALAAKKRFPKARLRYFDDEGPA 184

Query: 173 YNDLNNGKIDATISE--MDNFKVSSYMDQLELID--TLEILYSGIAVNKNNKELLHEMDR 228
             ++ +G+  A +S   +  F+V +  D+L + +   L +     AV K++ + L+ +D 
Sbjct: 185 IQEVLSGRAHALVSSDPLPRFEVLANPDRLFMPEGKPLALEPVAFAVRKSDPDTLNVLDN 244

Query: 229 VLLELETEGYIEELKQKW 246
            +  +E EG+++E K  W
Sbjct: 245 WIRMVEMEGWLKERKHYW 262