Pairwise Alignments

Query, 337 a.a., site-2 protease family protein from Methanococcus maripaludis S2

Subject, 899 a.a., chloride channel protein from Synechocystis sp000284455 PCC 6803

 Score = 61.2 bits (147), Expect = 1e-13
 Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 26/175 (14%)

Query: 178 LLIFGLI-NFNVILVLIAIFI--YFGASQEYRALVADTLFQ-----------------DV 217
           +++F L  NFNV+L L+      Y  A   +   + D L +                 D+
Sbjct: 394 IIVFELTGNFNVVLPLMVACATSYLVAESLFPRSLYDHLLETKGIFLAEEKPDHDFLADI 453

Query: 218 PAKDIMSKNIVYVNSEDTVDDVLNLMLENRFLGYPVLENGNIIGTITMNEISSTTAKTAK 277
            A  +M   +  +    T+  VL +M  +   G+PV++ G ++G  T  ++++   ++  
Sbjct: 454 RAGQVMKTEVESLEQSLTLAQVLPIMSNSHHRGFPVVQGGKLVGVFTQTDLANAAQESVH 513

Query: 278 V--KEIMSP-PVMVSPEAALNEL--IKGMANTDRVYVVDNGN-ILGIISKTDIVR 326
           +  K+IM+P P+ V PEA L+++  +       R+ VV+  N ++GII++TDI+R
Sbjct: 514 IALKQIMTPNPITVDPEAPLSDVLYLLNRYQLSRLPVVEGDNKLVGIITRTDIIR 568