Pairwise Alignments

Query, 337 a.a., site-2 protease family protein from Methanococcus maripaludis S2

Subject, 372 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  162 bits (411), Expect = 1e-44
 Identities = 101/283 (35%), Positives = 159/283 (56%), Gaps = 20/283 (7%)

Query: 3   SFKIARVMGIPIELHITFILLLIVVFYFW--------GIEGLILYMFLFTSVVLHELGHS 54
           SF I  + G  I +H+TF LLLI ++            +EG+   + +F  VVLHE GH 
Sbjct: 4   SFSIGTIAGTAIRVHVTFALLLIWIWLMHYRIGGTPAAMEGIAFIVAVFVCVVLHEFGHI 63

Query: 55  YVAKKYGVKIEKILLLPIGGMAMMSEISKE--GEFKIAIAGPLVSLALGTVL---LGIST 109
             A+++G+K   I LLPIGG+A +  + +E   EF IAIAGPLV++A+  VL   LG S 
Sbjct: 64  AAARRFGIKTPDITLLPIGGVARLERMPEEPGQEFVIAIAGPLVNVAIAAVLIAILGSSG 123

Query: 110 VTDYTLAEYP---LFQTVGGLNILLGIFNLLPAFPMDGGRVFRALLSKLTSMSYIKATKL 166
           +      E P       + G+N+ L IFN++PAFPMDGGRV RA L+  + +++ +AT++
Sbjct: 124 MEQIAGVEDPQSGFLARLAGVNVFLVIFNMIPAFPMDGGRVLRAALA--SRLTWSRATQI 181

Query: 167 ASTVGQYFALALLIFGLINFNVILVLIAIFIYFGASQEYRALVADTLFQDVPAKDIMSKN 226
           A+T+GQ  A      GL  +N +L+ IAIF+Y  A+ E +      +   V   D+M   
Sbjct: 182 AATIGQGLAFVFGFVGLF-YNPLLIFIAIFVYLAATAEAQNAQIREISGSVMISDVMITE 240

Query: 227 IVYVNSEDTVDDVLNLMLENRFLGYPVLE-NGNIIGTITMNEI 268
              ++   T+DD ++ +L      +PV++  G+  G +T +++
Sbjct: 241 FATLDRSATIDDAIDTLLATTQREFPVVDAAGHFEGLLTRDDM 283