Pairwise Alignments

Query, 337 a.a., site-2 protease family protein from Methanococcus maripaludis S2

Subject, 138 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 30/125 (24%), Positives = 70/125 (56%), Gaps = 11/125 (8%)

Query: 217 VPAKDIMSKNIVYVNSEDTVDDVLNLMLENRFLGYPVLEN-GNIIGTITMNEISSTTAK- 274
           +  +D M +  V + +  ++   +  +L+N  +G  V+++ GN++G ++  +  +   K 
Sbjct: 4   IKIRDHMDRQPVLLRANMSLATAVEKLLDNNKMGAAVVDDSGNLVGFLSQQDCLAVMLKS 63

Query: 275 ------TAKVKEIMSPPVM-VSPEAALNELIKGMANTD-RVY-VVDNGNILGIISKTDIV 325
                 T+ VK+ M   V+ V P+ ++ +L + M     ++Y VVDNG ++G I++T+++
Sbjct: 64  SYHCDLTSVVKDCMRTEVLYVGPDESILQLAEQMLGAKPKIYPVVDNGKVIGTINRTNVL 123

Query: 326 RTLSI 330
           R +++
Sbjct: 124 RAMNV 128