Pairwise Alignments

Query, 187 a.a., DNA-directed RNA polymerase from Methanococcus maripaludis S2

Subject, 708 a.a., 3' exoribonuclease (NCBI) from Rhodospirillum rubrum S1H

 Score = 51.2 bits (121), Expect = 4e-11
 Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 18/90 (20%)

Query: 79  PELQEVVDGEIVDVVEFGAFVR-LGPLDGLIHISQIMDDFVSFDPKREAIIGKETGKVLE 137
           PE+  V  G++V +++FGAFV  LG  DGL+HIS++  D V           K+ G V+ 
Sbjct: 619 PEIGVVYTGKVVKIMDFGAFVNFLGTRDGLVHISELSQDRV-----------KKVGDVVN 667

Query: 138 KGDKVRARIVAVSLREEKKRGSKIALTMRQ 167
            GD+V+ + V    R       KI L+M+Q
Sbjct: 668 VGDQVKVKCVGFDDR------GKIKLSMKQ 691