Pairwise Alignments

Query, 187 a.a., DNA-directed RNA polymerase from Methanococcus maripaludis S2

Subject, 700 a.a., polynucleotide phosphorylase/polyadenylase (RefSeq) from Shewanella loihica PV-4

 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 19/131 (14%)

Query: 38  LDKDIGFILSIVDVDNVSDGSIIYGDGAAYHETEFNVLTYVPELQEVVDGEIVDVVEFGA 97
           L ++ G  + + D   V   S   GD           +T   E+  V +G++V +V+FGA
Sbjct: 578 LTEETGTTIELEDDGTVKIASA-NGDATKEAIRRIQEITAEVEVGTVYNGKVVRIVDFGA 636

Query: 98  FVRLGP-LDGLIHISQIMDDFVSFDPKREAIIGKETGKVLEKGDKVRARIVAVSLREEKK 156
           FV + P  DGL+HISQI ++ V+                LE G +V+ +++ V       
Sbjct: 637 FVTILPGKDGLVHISQIAEERVA-----------NVSDYLEVGQEVKVKVMEVD------ 679

Query: 157 RGSKIALTMRQ 167
           R  ++ L+M++
Sbjct: 680 RQGRVRLSMKE 690