Pairwise Alignments

Query, 187 a.a., DNA-directed RNA polymerase from Methanococcus maripaludis S2

Subject, 771 a.a., transcriptional accessory protein from Dechlorosoma suillum PS

 Score = 43.9 bits (102), Expect = 7e-09
 Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 17/84 (20%)

Query: 84  VVDGEIVDVVEFGAFVRLGP-LDGLIHISQIMDDFVSFDPKREAIIGKETGKVLEKGDKV 142
           +++G + +V  FGAFV +G   DGL+H+S +   FV           K+  +V++ GD V
Sbjct: 658 ILEGVVTNVAAFGAFVDIGVHQDGLVHVSALSTKFV-----------KDPHEVVKAGDIV 706

Query: 143 RARIVAVSLREEKKRGSKIALTMR 166
           + +++ V +  +     +IALTMR
Sbjct: 707 KVKVLEVDMARK-----RIALTMR 725