Pairwise Alignments

Query, 304 a.a., dihydroorotate dehydrogenase from Methanococcus maripaludis S2

Subject, 424 a.a., Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  109 bits (273), Expect = 1e-28
 Identities = 84/304 (27%), Positives = 140/304 (46%), Gaps = 33/304 (10%)

Query: 9   IEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGIEKKPGHNNPTMVEVEGGFLNA 68
           I+  NP +LA+    +    + R  + G G V  K++G +    + +       G     
Sbjct: 11  IKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAVNVSSRYSAHYGANREV 70

Query: 69  MGLPNPGADEYAGEIERIKDEMKRMNVK--------------IIGSIYGKNDSEFQKAAE 114
           +G+ N         IE I D    +N++              I+  +    +  +++   
Sbjct: 71  LGINN---------IELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESWKRILP 121

Query: 115 II-GNYVDVLELNISCPHA--GGGYGSSIGQDPYLCKNVVSAVKDVSDIPVIAKLTPNVT 171
           ++     D +ELN  CPH     G G+++GQ P   + V    K    +PVI KLTPN+T
Sbjct: 122 LVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKLTPNIT 181

Query: 172 DIKEIANAVVNAGADGIVAINTLGPGMVIDIES--GVPILGNRV--GGMSGKAVKPIAVK 227
           DI+  A A    GAD +  INT+     +D++    +P +G++   GG  G AVKPIA+ 
Sbjct: 182 DIRVAARAAHRGGADAVSLINTINSITSVDLDRMVALPSVGSQSTHGGYCGSAVKPIALN 241

Query: 228 NVYDIC---SAVDVPVIGVGGITTGADAIEFMMAGASAVQVGTGVYYRGYDIFQKINNEI 284
            V +I        +P+ G+GGI +  DA EF+  G+ AVQV T     G+ I  ++ + +
Sbjct: 242 MVAEIARDPQTQGLPICGIGGIGSWRDAAEFIALGSGAVQVCTAAMLHGFRIVDEMKDGL 301

Query: 285 EEYL 288
             ++
Sbjct: 302 SRWM 305