Pairwise Alignments

Query, 304 a.a., dihydroorotate dehydrogenase from Methanococcus maripaludis S2

Subject, 339 a.a., dihydroorotate dehydrogenase (quinone) from Pseudomonas fluorescens FW300-N2C3

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 33/293 (11%)

Query: 2   LKTKLWDIEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGIEKKPGHNNPTMVEV 61
           L   +  + F NPV LAAG + + G+A+   A+ G G V   +V    +PG+  P +  +
Sbjct: 44  LPVTVMGLAFPNPVGLAAG-LDKNGAAIDGFAQLGFGFVEIGTVTPRPQPGNPKPRIFRL 102

Query: 62  EGG--FLNAMGLPNPGADEYAGEIERIKDEMKRMNVKIIGSIYGKN-DSEFQKAAEI--- 115
                 +N MG  N G D     +   K +       ++G   GKN D+  ++A +    
Sbjct: 103 PQAEAIINRMGFNNLGVDNLLARVAAAKYQ------GVLGINIGKNFDTPVERAVDDYLI 156

Query: 116 ----IGNYVDVLELNISCPHAGG----GYGSSIGQ--DPYLCKNVVSAVKDVSDIPVIAK 165
               +  +   + +N+S P+  G     +G S+ Q       +    A+     +P+  K
Sbjct: 157 CLDKVYAHASYVTVNVSSPNTPGLRSLQFGDSLKQLLADLARRRAELALTHGRHVPLAIK 216

Query: 166 LTPNVTDIK--EIANAVVNAGADGIVAINT-LGPGMVIDIESGVPILGNRVGGMSGKAVK 222
           + P++TD +  ++A A++  G D ++A NT LG   V  +E G     +  GG+SG  V+
Sbjct: 217 IAPDMTDEETTQVAQALIETGMDAVIATNTTLGREGVEGLEHG-----DEAGGLSGAPVR 271

Query: 223 PIAVKNVYDICS--AVDVPVIGVGGITTGADAIEFMMAGASAVQVGTGVYYRG 273
             +   V  + +  A  +P+I  GGIT G  A E + AGAS VQ+ +G  Y+G
Sbjct: 272 DKSTHTVKVLAAELAGRLPIIAAGGITEGKHAAEKITAGASLVQIYSGFIYKG 324