Pairwise Alignments

Query, 304 a.a., dihydroorotate dehydrogenase from Methanococcus maripaludis S2

Subject, 378 a.a., dihydroorotate dehydrogenase 2 from Synechococcus elongatus PCC 7942

 Score = 70.5 bits (171), Expect = 6e-17
 Identities = 79/307 (25%), Positives = 131/307 (42%), Gaps = 27/307 (8%)

Query: 2   LKTKLWDIEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGIEKKPGHNNPTMVEV 61
           L   LW + F  PV LAAG   + G A    +  G G     +V    +PG+  P +  +
Sbjct: 60  LAMSLWGLTFATPVGLAAG-FDKDGIAAPLWSDLGFGFAELGTVTALAQPGNPRPRLFRI 118

Query: 62  EGGF--LNAMGLPNPGADEYAGEIERIKDEMKRMNVKIIGSIYGKND--------SEFQK 111
                  N MG  N  A+  A  +     E +R     IG   GK+         S++  
Sbjct: 119 PQDLAAFNRMGFNNASAEALADTLRGYFPEGQRSIP--IGINLGKSKLTPLSGAVSDYVS 176

Query: 112 AAEIIGNYVDVLELNISCPHAGG--GYGSSIGQDPYLCKNVVSAVKDVSDIPVIAKLTPN 169
           +   + +  D   +N+S P+  G     +    +P L        ++    P++ K+ P+
Sbjct: 177 SFRSLRSLGDYFVVNVSSPNTPGLRSLQAVTELEPILA---ALQAENTEQRPLLLKIAPD 233

Query: 170 VTD--IKEIANAVVNAGADGIVAINTLGPGMVIDIESGVP----ILGNRVGGMSGKAVKP 223
           + D  +  IA+        GI+A NT     ++ +E  +P     L    GG+SG  ++ 
Sbjct: 234 LVDEEVVAIAHLAQRQQLAGIIATNTTIDKSLLSVEH-LPGRREPLATEAGGISGAPLRS 292

Query: 224 IAVKNVYDICSAVD--VPVIGVGGITTGADAIEFMMAGASAVQVGTGVYYRGYDIFQKIN 281
            + + +  +       +P+IGVGGI +  DA + ++AGAS VQV TG  Y G  + + I 
Sbjct: 293 RSTEVIRLLHRTTQGQLPIIGVGGIFSAEDAWQKIVAGASLVQVYTGWVYEGPLLVKTIQ 352

Query: 282 NEIEEYL 288
             + E L
Sbjct: 353 QGLLERL 359