Pairwise Alignments

Query, 304 a.a., dihydroorotate dehydrogenase from Methanococcus maripaludis S2

Subject, 339 a.a., dihydroorotate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 85/305 (27%), Positives = 147/305 (48%), Gaps = 40/305 (13%)

Query: 9   IEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGIEKKPGHNNPTMVEVEGG--FL 66
           + F NPV LAAG M + G ++      G G V   +V    +PG++ P +  ++     +
Sbjct: 52  LTFPNPVGLAAG-MDKDGESIDAFHAMGFGHVEVGTVTPRPQPGNDLPRLFRLKPAKAII 110

Query: 67  NAMGLPNPGADEYAGEIERIKDEMKRMNVKIIGSIYGKNDS--------EFQKAAEIIGN 118
           N MG  N G D        +K+ + +    ++G   GKN          ++    + +  
Sbjct: 111 NRMGFNNKGVDNL------VKNLIAKKTDIMVGVNIGKNKDTPVEQGKDDYLICMDKVYL 164

Query: 119 YVDVLELNISCPHAGGGYGSSIGQDPYLCKNVVSAVK----DVSD-----IPVIAKLTPN 169
           +   + +NIS P+  G      G    L   ++SA+K    +++D     +P+  K+ P+
Sbjct: 165 HAAYIAVNISSPNTPGLRSLQYGD---LLDELLSAIKAKQLELADKHKKYVPIALKIAPD 221

Query: 170 VT--DIKEIANAVVNAGADGIVAINTLGPGMVIDIESGVPILGNRVGGMSGKAVKPIAVK 227
           +T  +I+ IA A++    DG +A NT    +  D  SG+    N  GG+SGK +  ++ K
Sbjct: 222 LTIEEIENIAQALIKNQFDGAIATNTT---LTRDGVSGLAN-ANESGGLSGKPLTELSTK 277

Query: 228 NVYDI--CSAVDVPVIGVGGITTGADAIEFMMAGASAVQVGTGVYYRGYDIFQKINNEIE 285
            +  +  C    +P+IGVGGI +  DA+    AGA+ VQ+ +G  Y+G  + ++I   +E
Sbjct: 278 VIKQLATCLQGQIPIIGVGGINSAEDALAKFDAGATMVQIYSGFIYQGPKLIKEI---VE 334

Query: 286 EYLLK 290
            Y LK
Sbjct: 335 AYRLK 339