Pairwise Alignments

Query, 253 a.a., TatD family hydrolase from Methanococcus maripaludis S2

Subject, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

 Score = 49.7 bits (117), Expect = 6e-11
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 15/144 (10%)

Query: 2   IDSHVHADTRPYEDFELMATVFDCVITHAHDPLK--MRSFDVALDYFDKILGNEIAKARK 59
           +DSH H D   Y+D  L A V D V+  AH      + S  V LD F K+L      ++ 
Sbjct: 3   VDSHCHLDKLDYQD--LHADVSD-VLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQ- 58

Query: 60  NGLNMKACIGIHPRAIPPKIDYDVLKEYLKKENVVGVGEIGLEKCSKEEIE-----VFEN 114
               + A  G+HP  +      D+  +Y +   VV +GE GL+   + E        F  
Sbjct: 59  ----VYASCGVHPLDVQSDFSLDLFHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQ 114

Query: 115 QITIAREMDLPAVVHTPRTNKEAV 138
           QI  A  ++ P ++HT    ++ +
Sbjct: 115 QIETAVALNKPLIIHTRNAQQDTL 138