Pairwise Alignments

Query, 433 a.a., MBL fold metallo-hydrolase from Methanococcus maripaludis S2

Subject, 469 a.a., Predicted exonuclease of the beta-lactamase fold involved in RNA processing from Pseudomonas stutzeri RCH2

 Score =  106 bits (265), Expect = 1e-27
 Identities = 113/472 (23%), Positives = 208/472 (44%), Gaps = 52/472 (11%)

Query: 3   LYFRGGASEVGRSCVELKTEKST-VLFDCGVKLSHEESEYP-----ILDNLNADCVFASH 56
           L F G   +V  SC  ++T     VL +CG+     E E         D    D V  SH
Sbjct: 4   LSFLGAIQQVTGSCYLIETHDGIRVLLECGMHQGRREEESDNRAAFAFDPTTLDAVVLSH 63

Query: 57  AHLDHTGGIPLLIRKGMVPAIYATEVTKAISKELLRDSIKIAGAEGQ------------- 103
           AH+DH+G +P L+  G    ++ T+ T  + + +L DS +I   + +             
Sbjct: 64  AHIDHSGLLPRLVALGYRGPVHCTDATAELLELMLLDSAQIQEKDAEWENKWRARIGKPM 123

Query: 104 -DIPYDKADVNKSLNLFRKARYNHPKDF-KDFEFEFFNAGHIPGSSTISLNYGG----KR 157
               Y + D  + L+      Y    +  +     F +AGHI GSS + ++       +R
Sbjct: 124 IQPLYTRVDAERMLSQREPHAYGETFEVAQGVVVTFHDAGHILGSSIVQMDVSDHGRTRR 183

Query: 158 VVYTGDTKVSDTDLVKGADLSYTKEDIACLIVESTYGDKNQENREDAEKNFINKIKETLE 217
           +V++GD   + + L+    +    ++   +++ESTYGD++  + ED  +     +++   
Sbjct: 184 LVFSGDLGNACSPLMHPPTVL---KEADVVLMESTYGDRDHRSHEDTVEELAGILQQAHR 240

Query: 218 RGGIPLVPVFAVDRSQEILMILNK--HDFGVP---VYFDG-MGRKITRIMLQYPKFLNHP 271
            GG  L+P FAV R+Q+++  L +   +  +P   V+ D  M      I   Y   L+  
Sbjct: 241 DGGNVLMPSFAVGRTQDLIYYLGRFYREGRLPQQAVFLDSPMAIGANAIYSHYKDQLD-L 299

Query: 272 DDLKAA------------FLNVIEVESKDRPKIIKDIKQNGGIIVSTAGMLEGGPIIPYI 319
           + + AA            +L +++        +  +  ++G II++ +GM  GG I+ + 
Sbjct: 300 NGIDAALSGTSGKLYAERWLPILKPTPTPEESMAINRFKSGVIIIAGSGMCTGGRILHHF 359

Query: 320 HEFMEDPKNSLIFTGYQVEETAGRKLLE-TGKIEIGEFDIEPKLEIASY-QFSAHGEMDE 377
              +   +  L+  G+Q   T GR +++  G +++    I    +I +   FSAH    +
Sbjct: 360 KHNLWREECHLVIPGFQARGTLGRAIVDGAGSVKLLHQRIAVNAKIHTLGGFSAHAGQSQ 419

Query: 378 LREIVKK-ANPEVLVIQHGEEEVVKIFKDWAVSQGFNENSVFTPKIGDKIKL 428
           L + V    N   L + HGE E +++ +  A+    N  +   P+ GD+I L
Sbjct: 420 LIDWVSNFENRPELYLVHGELEKMQVLQQ-AIRDRLNWEARI-PEPGDRIAL 469