Pairwise Alignments

Query, 433 a.a., MBL fold metallo-hydrolase from Methanococcus maripaludis S2

Subject, 517 a.a., Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain from Pseudomonas stutzeri RCH2

 Score = 78.2 bits (191), Expect = 6e-19
 Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 34/265 (12%)

Query: 2   ELYFRGGASEVGRSCVELKTEKS-TVLFDCGVKLSHEESEYPILDNLNADCVFA------ 54
           ++   G    V  SC +L  + S ++L DCG+   +E S          D  F+      
Sbjct: 5   DIEHHGAKDGVTGSCHQLHMDASHSLLVDCGLFQGNETSSDGRAATGRLDIEFSLRTVQA 64

Query: 55  ---SHAHLDHTGGIPLLIRKGMVPAIYATEVTKAISKELLRDSIKIAGAEGQDIPYDKAD 111
              +H H+DH G IP L+  G    IY +E +  +   +L D+ K+  +       D+  
Sbjct: 65  LVVTHVHIDHVGRIPYLLAAGYKGPIYCSEPSAKLLPIVLEDAFKLGFSR------DQKA 118

Query: 112 VNKSLNL----FRKARYNHPKDFKDFE-----FEFFNAGHIPGSSTISLNYG------GK 156
           V + L L     R   Y       + E          AGHI GS+ + ++         +
Sbjct: 119 VERYLKLVEQRLRPLPYQRWSTLLETEELIARVRLQRAGHILGSAYVEIDLTYPTSGESQ 178

Query: 157 RVVYTGDTKVSDTDLVKGADLSYTKEDIACLIVESTYGDKNQENREDAEKNFINKIKETL 216
           R+V++GD   +   L+   + S  + DI  L++ESTYGD+  E+R    +     I+  L
Sbjct: 179 RIVFSGDLGAAHAPLLMPPE-SPERADI--LVLESTYGDRLHEDRTSRRQRLEAVIEHAL 235

Query: 217 ERGGIPLVPVFAVDRSQEILMILNK 241
           +  G  L+P F++ R+QE+L  L +
Sbjct: 236 QDQGTVLIPAFSIGRTQELLYELEE 260



 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 14/132 (10%)

Query: 277 AFLNVIEVESK-DRPKIIKDIKQNG--GIIVSTAGMLEGGPIIPYIHEFMEDPKNSLIFT 333
           AF N+I ++S  D   ++  + Q     I+++  GM  GG I+ Y+   + DP++ ++F 
Sbjct: 362 AFDNLIMIDSHADHIAVVNHLTQTARPAIVIAGNGMCSGGRIVNYLKAMLHDPRHDVLFV 421

Query: 334 GYQVEETAGRKLLETG------KIEIGEFDIEPKL-EIASYQFSAHGEMDELREIV--KK 384
           GYQ + T G+ + + G       ++   FDI  ++  I  Y  SAH +   L E V   +
Sbjct: 422 GYQAQGTPGQAIQQYGPKGGYVDLDGERFDIRARVTSIGGY--SAHADQKGLVEFVTGMR 479

Query: 385 ANPEVLVIQHGE 396
             P  + + HGE
Sbjct: 480 EWPTKIGVVHGE 491