Pairwise Alignments

Query, 315 a.a., replication factor C small subunit from Methanococcus maripaludis S2

Subject, 623 a.a., DNA polymerase III subunit gamma/tau from Rhodopseudomonas palustris CGA009

 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 63/267 (23%), Positives = 126/267 (47%), Gaps = 39/267 (14%)

Query: 8   KYRPETLSEVVGHHEIIKRLTNYVEKKSMPHL-LFSGSPGVGKTTAALALAKDL------ 60
           KYRP +  +++G   +++ ++N  +   +P   + +G  GVGKTT A  LA+ L      
Sbjct: 33  KYRPNSFDDLIGQEAVVRTVSNAFDTGRIPQAWILTGVRGVGKTTTARILARALNYELPD 92

Query: 61  ------------YG-------DTWRENFLELNSSDERGIDVIRTKVKDFARTKPIGDAPF 101
                       +G       ++   + LE++++   G+D +R ++ D  R  P   A +
Sbjct: 93  GSVKGPTIHMPVHGVHCKAIMESRHMDVLEMDAASHTGVDDVR-QINDSVRYAP-ASARY 150

Query: 102 KVIFLDESDALTSDAQNALRRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKT 161
           KV  +DE   L++ A NA  +T+E+  +  +F+ +     K+   + SRC  F    ++ 
Sbjct: 151 KVYIIDEVHMLSTAAFNAFLKTLEEPPEHAKFVFATTEIRKVPVTVLSRCQRFDLRRVEA 210

Query: 162 EDLVENLKDISEKENLNLEKGGIDAIIYVSEGDMRKAINVLQTAAAVSDEITEEIVYKVA 221
           + L+ +L +I++KE + +E   +  +   +EG +R ++++   A A             A
Sbjct: 211 DVLMNHLSNIAQKEGVEVEPEALGIVARAAEGSVRDSLSLFDQAIA-----------HAA 259

Query: 222 SKARPDEIKKMTQLALNGKFVEAREQL 248
              R D +++M  LA   + +E  + L
Sbjct: 260 GVVRADAVRQMLGLADRTRVIELFDAL 286