Pairwise Alignments

Query, 315 a.a., replication factor C small subunit from Methanococcus maripaludis S2

Subject, 548 a.a., DNA polymerase III, subunit gamma/tau from Dechlorosoma suillum PS

 Score = 91.3 bits (225), Expect = 5e-23
 Identities = 73/299 (24%), Positives = 140/299 (46%), Gaps = 24/299 (8%)

Query: 8   KYRPETLSEVVGHHEIIKRLTNYVEKKSMPHL-LFSGSPGVGKTTAALALAKDLYGDTWR 66
           K+RP + S +VG   +++ LT+ + ++ + H  LF+G+ GVGKTT A  LAK L  ++  
Sbjct: 9   KWRPRSFSTLVGQEHVVRALTHALTEQRLHHAYLFTGTRGVGKTTLARILAKSLNCESGI 68

Query: 67  E-------------------NFLELNSSDERGIDVIRTKVKDFARTKPIGDAPFKVIFLD 107
                               + LE++++    +D +R  +++       G   FKV  +D
Sbjct: 69  SATPCGQCSACQEIDAGRFVDLLEVDAATNTRVDEMRQLLENAVYAPTRGR--FKVYVID 126

Query: 108 ESDALTSDAQNALRRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTEDLVEN 167
           E   L++ A NA+ +T+E+  +  +FIL+   P KI   + SRC  F    +  + +  +
Sbjct: 127 EVHMLSNSAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPPQAITGH 186

Query: 168 LKDISEKENLNLEKGGIDAIIYVSEGDMRKAINVL-QTAAAVSDEITEEIVYKVASKARP 226
           L  I E E++  E   +  +   + G MR A+++L Q  A  + ++ E +V  +      
Sbjct: 187 LSHILEAESVPFEAPALALLARSANGSMRDALSLLDQAIAHGTGKVEESLVRDMLGTVDQ 246

Query: 227 DEIKKMTQLALNGKFVEAREQLYNLMIDWGMSGEDILIQVFREVPNLDISEKEKVHLVE 285
           D +  + +    G  V A   + +LM +  +S +  L  +   +  L +++     + E
Sbjct: 247 DYLFTLLEAMAQGD-VSAMLSVADLMTERSLSFDSALQDLAAMLTRLQVAQLAPAAIAE 304