Pairwise Alignments

Query, 315 a.a., replication factor C small subunit from Methanococcus maripaludis S2

Subject, 315 a.a., replication factor C small subunit from Methanococcus maripaludis JJ

 Score =  619 bits (1596), Expect = 0.0
 Identities = 314/315 (99%), Positives = 314/315 (99%)

Query: 1   MQKPWVEKYRPETLSEVVGHHEIIKRLTNYVEKKSMPHLLFSGSPGVGKTTAALALAKDL 60
           MQKPWVEKYRPETLSEVVGHHEIIKRLTNYVEKKSMPHLLFSGSPGVGKTTAALALAKDL
Sbjct: 1   MQKPWVEKYRPETLSEVVGHHEIIKRLTNYVEKKSMPHLLFSGSPGVGKTTAALALAKDL 60

Query: 61  YGDTWRENFLELNSSDERGIDVIRTKVKDFARTKPIGDAPFKVIFLDESDALTSDAQNAL 120
           YGDTWRENFLELNSSDERGIDVIRTKVKDFARTKPIGDAPFKVIFLDESDALTSDAQNAL
Sbjct: 61  YGDTWRENFLELNSSDERGIDVIRTKVKDFARTKPIGDAPFKVIFLDESDALTSDAQNAL 120

Query: 121 RRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTEDLVENLKDISEKENLNLE 180
           RRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTEDLVENLKDISEKENLNLE
Sbjct: 121 RRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTEDLVENLKDISEKENLNLE 180

Query: 181 KGGIDAIIYVSEGDMRKAINVLQTAAAVSDEITEEIVYKVASKARPDEIKKMTQLALNGK 240
           KGGIDAIIYVSEGDMRKAINVLQTAAAVSDEITEEIVYKVASKARPDEIKKMTQLALNGK
Sbjct: 181 KGGIDAIIYVSEGDMRKAINVLQTAAAVSDEITEEIVYKVASKARPDEIKKMTQLALNGK 240

Query: 241 FVEAREQLYNLMIDWGMSGEDILIQVFREVPNLDISEKEKVHLVEAIGECDFRIVEGSNE 300
           FVEAREQLYNLMIDWGMSGEDILIQVFREVPNLDISEKEKVHLVE IGECDFRIVEGSNE
Sbjct: 241 FVEAREQLYNLMIDWGMSGEDILIQVFREVPNLDISEKEKVHLVETIGECDFRIVEGSNE 300

Query: 301 RIQLSALLAKMGILE 315
           RIQLSALLAKMGILE
Sbjct: 301 RIQLSALLAKMGILE 315