Pairwise Alignments

Query, 321 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 664 a.a., diguanylate cyclase with GAF sensor from Synechococcus elongatus PCC 7942

 Score = 54.3 bits (129), Expect = 8e-12
 Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 10/144 (6%)

Query: 36  SERDLVKLYDLKV-LDKIVINDIMTKDLVILDEEESIDELG--KLIKQYRHMGYPVFNSN 92
           +ERDLV+L  + + +    I ++ T  +  + E +  D +    L +QY     PV N+ 
Sbjct: 55  TERDLVRLTAIGITITSTPIEEVATSTVTTIQESDIYDVIRTLNLFRQYNVRHLPVVNAT 114

Query: 93  KELVGIVTFDDLRTKKSSMSRLKKLKIKDIMTKKDEIVSISPYSSASEAQKIMVEYDIGR 152
            +L+GI+T++ +R     +  L+  ++ ++M K   I+    Y SA    K+M +  I  
Sbjct: 115 HQLIGIMTYEGIRRLLKPIDLLRLRRVSEVMVK--SIICADRYQSALSLAKLMSDRLISC 172

Query: 153 VLVVDDG-----KLKGIVTKGDIV 171
           V++ +       K  G+VT+ DI+
Sbjct: 173 VVITEKDPSGFPKPIGLVTERDIL 196



 Score = 24.3 bits (51), Expect = 0.009
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 2/97 (2%)

Query: 78  IKQYRHMGYPVF-NSNKELVGIVTFDDLRTKKSSMSRLKKLKIKDIMTKKDEIVSISPYS 136
           + + +H  Y +   SN+ LVGI T  DL    +    +    I+++ T     +  S   
Sbjct: 32  VMERQHSSYVLLMESNQTLVGIFTERDLVRLTAIGITITSTPIEEVATSTVTTIQESDIY 91

Query: 137 SASEAQKIMVEYDIGRVLVVD-DGKLKGIVTKGDIVR 172
                  +  +Y++  + VV+   +L GI+T   I R
Sbjct: 92  DVIRTLNLFRQYNVRHLPVVNATHQLIGIMTYEGIRR 128