Pairwise Alignments

Query, 503 a.a., sodium-dependent transporter from Methanococcus maripaludis S2

Subject, 430 a.a., Sodium-dependent transporter family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  127 bits (320), Expect = 6e-34
 Identities = 91/340 (26%), Positives = 169/340 (49%), Gaps = 29/340 (8%)

Query: 37  GGGAFLIPYFVALLFVGIMVMVLELALGHSTKGSAPLALRRLG------KNFEWIGWLAI 90
           GGGAF++ +   +  +G  VM+ E  +G   + S   AL+ L         + W  +  +
Sbjct: 6   GGGAFVLMFLACIALIGAPVMLAETLIGRRARQSPANALKVLAVEAGHSTKWSWGAFAGM 65

Query: 91  ATAFIITTYYTAIIAWALVYLVKLF---MVGFPTDFGGFFFSDILALSSGHGDLGGFNLP 147
            TA +I ++Y+ +  W+L Y++ +      G   D  G +F +++A          + L 
Sbjct: 66  ITALLILSFYSVVGGWSLDYIIDMGRGDFQGATPDQVGAYFGNVIA--------DPWRLT 117

Query: 148 ILVGLALIWGVNYIVVNSGVRKGLEKANEILMPVLFFLILALVVRSITLPGGLMGIEYYL 207
           +   + ++  ++ +V+  GV  GLE++  I+MP+LF +IL L+  S+T    + G+ +  
Sbjct: 118 LWHTIFMV--LSAVVIARGVVAGLERSLRIMMPLLFVMILVLLGYSMTTGHFMEGVHFMF 175

Query: 208 TPNFAVLLTPKVWIDAFSQIFFTLSLGFGIMVAYSSYLPKKSDLTASAFTISLMNCGFSF 267
             +F         + A    FF+LS+G G ++ Y +Y+PK + LT + F ++L++   S 
Sbjct: 176 --DFQPEKVLDGLLPAMGHAFFSLSVGVGSIMIYGAYMPKNASLTRTVFGVALLDTFVSL 233

Query: 268 LAGFAVFGTLGYMAMTQGVPISEVVTQSIGLAFVAFPQALSLMPGGIILAAIFFIALFVA 327
           LAG A+F     +    G+  SE      GL FV+ P A   M  G ++  +FF+ + +A
Sbjct: 234 LAGVALFP----IVFAAGLNPSE----GPGLMFVSLPFAFGSMAFGQVMGVVFFLLVAIA 285

Query: 328 GISSSVSLVESTASAVIDKFNLPRHKAASAVIATSFFASL 367
             SS++SL+E   + ++++  L R      +  T +F  L
Sbjct: 286 AWSSAISLLEPMVAYLVERTLLSRAWVTFWLAFTCWFVGL 325