Pairwise Alignments

Query, 503 a.a., sodium-dependent transporter from Methanococcus maripaludis S2

Subject, 430 a.a., Sodium-dependent transporter family protein from Pseudomonas fluorescens FW300-N1B4

 Score =  120 bits (301), Expect = 1e-31
 Identities = 81/324 (25%), Positives = 165/324 (50%), Gaps = 29/324 (8%)

Query: 37  GGGAFLIPYFVALLFVGIMVMVLELALGHSTKGSAPLALRRLG------KNFEWIGWLAI 90
           GGGAF++ +   +  +G+ VM+ E  +G   + S   AL+ L         + W  +  +
Sbjct: 6   GGGAFVLMFLACIALIGVPVMLAETLIGRRARQSPANALKVLALEAGHSAKWSWGAFAGM 65

Query: 91  ATAFIITTYYTAIIAWALVYLVKLF---MVGFPTDFGGFFFSDILALSSGHGDLGGFNLP 147
            TA +I ++Y+ +  W+L Y++ +      G   D  G +F +++A          + L 
Sbjct: 66  ITALLILSFYSVVGGWSLDYIIDMGRGDFQGATPDQVGAYFGNVIA--------DPWRLT 117

Query: 148 ILVGLALIWGVNYIVVNSGVRKGLEKANEILMPVLFFLILALVVRSITLPGGLMGIEYYL 207
           +   + ++  ++ +V+  GV  GLE++  I+MP+LF +++ L+  S+T    + G+ +  
Sbjct: 118 LWHTIFML--LSAVVIAKGVVAGLERSLRIMMPLLFVMVIVLLGYSMTTGHFMEGVHFMF 175

Query: 208 TPNFAVLLTPKVWIDAFSQIFFTLSLGFGIMVAYSSYLPKKSDLTASAFTISLMNCGFSF 267
             +   +L     + A    FF+LS+G G ++ Y +Y+PK S ++ +   ++L++   S 
Sbjct: 176 DFHPEKVLDGL--LPAMGHAFFSLSVGVGSIMIYGAYMPKSSSISGTIVGVALLDTFVSL 233

Query: 268 LAGFAVFGTLGYMAMTQGVPISEVVTQSIGLAFVAFPQALSLMPGGIILAAIFFIALFVA 327
           +AG A+F     +    G+  SE      GL FV+ P A   +  G ++  +FF+ + +A
Sbjct: 234 VAGLALFP----IVFAAGLNPSE----GPGLMFVSLPFAFGNVAFGQLMGVVFFVLVAIA 285

Query: 328 GISSSVSLVESTASAVIDKFNLPR 351
             SS++SL+E   + ++++  + R
Sbjct: 286 AWSSAISLLEPMVAYLVERTKISR 309