Pairwise Alignments

Query, 503 a.a., sodium-dependent transporter from Methanococcus maripaludis S2

Subject, 448 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  181 bits (460), Expect = 4e-50
 Identities = 131/454 (28%), Positives = 227/454 (50%), Gaps = 35/454 (7%)

Query: 2   AREQWASKMGFILAAVGSAVGLGNIWRFPYMAYENGGGAFLIPYFVALLFVGIMVMVLEL 61
           +R Q+ S+ GFI+AA GSAVGLGN+W FP  A  NGG  FL+ Y   +  +   ++V EL
Sbjct: 9   SRGQFTSRFGFIMAAAGSAVGLGNVWGFPTQAASNGGAVFLLVYLCMVFLLAYPMLVAEL 68

Query: 62  ALGHSTKGSAPLALRRLGKNFEW----IGWLAIATAFIITTYYTAIIAWALVYLVKLFMV 117
            +G   + +   A R +    +W    +G + +    +I ++Y  +  W    +  LF  
Sbjct: 69  TIGRYGQSNPIRAFRSVWPQGKWGAILLGVIGMVVVSLILSFYAIVAGW---LVGSLFGS 125

Query: 118 GFPTDFGGFFFSDILALSSGHGDLGGFNLPILVGLALIWGVNYIVVNSGVRKGLEKANEI 177
           G  T  G    S  L   S        NL ++V   ++      VV +GV  G+EK +  
Sbjct: 126 GL-TLIGADSASQWLTSFSTER-----NLILMVSFMVL---TMFVVRNGVANGIEKWSTR 176

Query: 178 LMPVLFFLILALVVRSITLPGGLMGIEYYLTPNFAVLLTPKVWIDAFSQIFFTLSLGFGI 237
           LMP+LF L   L V   T  G L G++ YL P+ +   TP V + A  Q FF+LSLG  +
Sbjct: 177 LMPLLFVLFGLLTVYIFTQEGALDGLKMYLVPDLS-HFTPDVVVSAMGQAFFSLSLGVCV 235

Query: 238 MVAYSSYLPKKSDLTASAFTISLMNCGFSFLAGFAVFGTLGYMAMTQGVPI---SEVVTQ 294
           M  Y SYL K+++L  +A  ++L++ G +F+AG  V   + ++A   GV I   S  +  
Sbjct: 236 MTTYGSYLNKEANLPKTAAQVALIDTGVAFIAGLMVLPAM-FVAKHNGVEIFSSSGELLN 294

Query: 295 SIGLAFVAFPQALSLMPG-GIILAAIFFIALFVAGISSSVSLVESTASAVIDKFNLPRHK 353
           S  L F   P     M   G ++  IFF+ + +A ++SS+S++E   +  +++    + K
Sbjct: 295 SDTLVFTVLPAMFDTMGAVGAVIGIIFFLLMIIAALTSSISMLEVPVACAVEEL---QQK 351

Query: 354 AASAVI----ATSFFASLIYATNAGLYWLDSVDHYINWFTIPLVAVLEIIVSIWIFKG-- 407
            +SAV+      +  + +I    + L+ L  V ++   ++ P++A+L  +++ WI+    
Sbjct: 352 RSSAVLWIGGLVTIISGVIVLNFSSLFGL--VINFTTVYSQPIIALLITLIAGWIWNRNQ 409

Query: 408 --SKLEKYIDNLSEYNLGSFWKFFAGIFSPLFLI 439
             S+L++   ++        W ++  +  P+ ++
Sbjct: 410 ILSELKQGCPDIENSLFWKIWPWYVRLVCPVLML 443