Pairwise Alignments

Query, 503 a.a., sodium-dependent transporter from Methanococcus maripaludis S2

Subject, 453 a.a., sodium-dependent symporter family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  190 bits (482), Expect = 1e-52
 Identities = 132/458 (28%), Positives = 212/458 (46%), Gaps = 31/458 (6%)

Query: 3   REQWASKMGFILAAVGSAVGLGNIWRFPYMAYENGGGAFLIPYFVALLFVGIMVMVLELA 62
           R+ +A+++G + A +GSAVGLGNIW+FP +  +NGG  FL+ Y +A L VG+ VM+ E+ 
Sbjct: 8   RDGFATRLGVLAATLGSAVGLGNIWKFPALTGQNGGATFLLVYIIATLLVGLPVMISEIM 67

Query: 63  LGHSTKGSAPLALRRLG-KNFEW--IGWLAIATAFIITTYYTAIIAWALVYLVKLFMVGF 119
           LG   K +A    R LG K   W  IG   +  A +I  +YT +  W   Y+ K      
Sbjct: 68  LGRKAKANAVRTYRELGPKGQPWSLIGISGVIAAVLIMGFYTDVAGWVFAYIFKAMS--- 124

Query: 120 PTDFGGFFFSDILALSSGHGDLGGFNLPILVGLALIWGVNYIVVNSGVRKGLEKANEILM 179
               G    +D          L G     L+   ++  +   ++  GV  G+E+  +ILM
Sbjct: 125 ----GSIATTDPAVAKEAFVALVGSPTQSLMWQWIVLALVSAIILGGVSSGIERTTKILM 180

Query: 180 PVLFFLILALVVRSITLPGGLMGIEYYLTPNFAVLLTPKVWIDAFSQIFFTLSLGFGIMV 239
           PVL  L+  +  RS+TLP    G+ +  TP+F+  +T  V + A    FF LS+G G M 
Sbjct: 181 PVLLLLLCVVCARSLTLPKAAEGLAFLFTPDFS-KITGGVILMALGLAFFKLSIGMGTMT 239

Query: 240 AYSSYLPKKSDLTASAFTISLMNCGFSFLAGFAVFGTLGYMAMTQGVPISEVVTQSIGLA 299
            Y SY     ++  +A  + L +   S LAG A+F  +           S        L 
Sbjct: 240 TYGSYFRDDQNIPVTAARVMLCDLSISILAGVAIFPAVFNFGFEPSAGPS--------LL 291

Query: 300 FVAFPQALSLMPGGIILAAIFFIALFVAGISSSVSLVESTASAVIDKFNLPRHKA--ASA 357
           F+  P   + MPGG +   IFF    +A   + +SL E   + ++++F + R KA   +A
Sbjct: 292 FMTIPAVFASMPGGQLFTVIFFCLTAIAATGAMLSLFEVPVAWLVEEFKMSRAKATIGTA 351

Query: 358 VI-------ATSFFASLIYATNAGLYWLDSVDHYINWFTIPLVAVLEIIVSIWIFKGSKL 410
           ++       AT   + L      GL   D  D   +   +P+  +   I + W++   + 
Sbjct: 352 LVLGVMGAPATLSMSVLGDFKMFGLNMFDLYDFVSSNILLPVGGIFICIFAGWVWGSKRT 411

Query: 411 EKYIDN---LSEYNLGSFWKFFAGIFSPLFLIYMILNG 445
            + + N   L    + S + F     SP+ +  ++LNG
Sbjct: 412 RELLSNGGHLDNAAVVSGFLFVVKWVSPVLVTIVLLNG 449