Pairwise Alignments

Query, 241 a.a., 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase from Methanococcus maripaludis S2

Subject, 247 a.a., 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) from Pseudomonas stutzeri RCH2

 Score =  181 bits (458), Expect = 2e-50
 Identities = 95/237 (40%), Positives = 144/237 (60%), Gaps = 5/237 (2%)

Query: 1   VLVIPAVDMKNKKCVQLIQGNPDKKHVELDNPPEIAKKWVNEGAEMLHLVDLDGALDGKR 60
           +L+IPA+D+K+  CV+L QG  D   V  D+P  +A KWV  G   LHLVDL+GA +G+ 
Sbjct: 1   MLIIPAIDLKDGACVRLRQGLMDDATVFSDDPVAMAAKWVEAGCRRLHLVDLNGAFEGQP 60

Query: 61  VNDEFIEEIIKK-SGVPVQIGGGIRSIEDAEYLVEKGAKKVIIGTIAVENPEIIKELSKR 119
           VN E +  I K+   +P+QIGGGIR++E  E+ V  G   VIIGT AV+ P  + E  + 
Sbjct: 61  VNGEVVTAIAKRYPDLPIQIGGGIRTLETIEHYVRAGVSYVIIGTKAVKEPGFVTEACRA 120

Query: 120 IGSEKIMVSLDAKDGKVVIKGWKEKTKYTPVQIGKILEEMGAGSILFTNVDSEGLLNGIN 179
               K++V LDAKDG V   GW E +    V + +  E  G  +I++T++  +G++ G N
Sbjct: 121 FPG-KVIVGLDAKDGFVATDGWAEVSSVQAVDLARRFEADGVSAIVYTDIAKDGMMQGCN 179

Query: 180 IEPTKELVDNLKIPIVASGGVTTIDDLLKLKEI---GVYGVVVGSAIYKNMINLKDA 233
           +E T  L +  +IP++ASGG+  I D+ KL +    G+ G + G AIY+  +++ +A
Sbjct: 180 VEATVALANASRIPVIASGGIHNIGDIQKLLDTNTPGIVGAITGRAIYEGTLDVAEA 236