Pairwise Alignments

Query, 241 a.a., 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase from Methanococcus maripaludis S2

Subject, 250 a.a., 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) from Burkholderia phytofirmans PsJN

 Score =  187 bits (475), Expect = 2e-52
 Identities = 98/238 (41%), Positives = 150/238 (63%), Gaps = 6/238 (2%)

Query: 1   VLVIPAVDMKNKKCVQLIQGNPDKKHVELDNPPEIAKKWVNEGAEMLHLVDLDGALDGKR 60
           +L+IPA+D+K+ +CV+L QG+ D+  +  + P  +A+ WV+ GA  LHLVDL+GA  GK 
Sbjct: 1   MLLIPAIDLKDGQCVRLKQGDMDQATIFSEEPAAMARHWVDRGARRLHLVDLNGAFAGKP 60

Query: 61  VNDEFIEEIIKKSG--VPVQIGGGIRSIEDAEYLVEKGAKKVIIGTIAVENPEIIKELSK 118
            N++ I  II++ G  +PVQ+GGGIR +   E  ++ G   VIIGT AV+NP  +++   
Sbjct: 61  KNEDAIRAIIEEVGGEIPVQLGGGIRDLNTIERYLDDGLSYVIIGTAAVKNPGFLQDACT 120

Query: 119 RIGSEKIMVSLDAKDGKVVIKGWKEKTKYTPVQIGKILEEMGAGSILFTNVDSEGLLNGI 178
             G   I+V LDAKDGKV   GW + T +    + +  E+ G  SI++T++  +G+L GI
Sbjct: 121 AFGGH-IIVGLDAKDGKVATDGWSKLTGHEVADLARKFEDYGCESIIYTDIGRDGMLQGI 179

Query: 179 NIEPTKELVDNLKIPIVASGGVTTIDDLLKLKEI---GVYGVVVGSAIYKNMINLKDA 233
           NIE T  L   +KIP++ASGG++ + D+  L E+   G+ GV+ G AIY   ++   A
Sbjct: 180 NIEATVRLARAVKIPVIASGGLSNLTDIESLCEVEDEGIEGVICGRAIYSGDLDFAAA 237



 Score = 30.8 bits (68), Expect = 3e-05
 Identities = 24/119 (20%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 125 IMVSLDAKDGKVVIKGWKEKTKYT-----PVQIGKILEEMGAGSILFTNVDSEGLLNGIN 179
           ++ ++D KDG+ V     +  + T     P  + +   + GA  +   +++        N
Sbjct: 3   LIPAIDLKDGQCVRLKQGDMDQATIFSEEPAAMARHWVDRGARRLHLVDLNGAFAGKPKN 62

Query: 180 IEPTKELVDNL--KIPIVASGGVTTIDDLLKLKEIGVYGVVVGSAIYKNMINLKDAIEA 236
            +  + +++ +  +IP+   GG+  ++ + +  + G+  V++G+A  KN   L+DA  A
Sbjct: 63  EDAIRAIIEEVGGEIPVQLGGGIRDLNTIERYLDDGLSYVIIGTAAVKNPGFLQDACTA 121