Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 658 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  150 bits (378), Expect = 3e-40
 Identities = 142/585 (24%), Positives = 259/585 (44%), Gaps = 75/585 (12%)

Query: 187 DVLNNDHTLVDSIKASTGDESTLFLEN----YRISTSVVSGN-SRAVGTTASDV--VYNT 239
           +VLNN+   VD  KA T   +T+F+ +     R+STSV   + +RA+GT        Y  
Sbjct: 107 EVLNNNFKEVDDFKAMTAGVATVFVRSGDDFIRVSTSVSKQDGTRAIGTVLDRAGPAYGP 166

Query: 240 VVKENTEFMGSANVVGQSFLTKYVPLKDSNGATIGMVFVG-----TPEAQFTQLVNNARN 294
           V+   + ++G A + G+ ++++Y P++DS+G  I +++VG        AQF  L      
Sbjct: 167 VISGQS-YIGRALLFGRFYMSQYTPVRDSSGKIIAVLYVGFDYTDAQNAQFENLKRFRIG 225

Query: 295 NTIIIALFGLLIAVVISLVSSRSITKPINQLEDGVHKFGSGDYDHTINVKTGDELEELAN 354
            T  +AL       ++     +++      +   + K G G +       T ++   +A 
Sbjct: 226 QTGSLALLDEQNKWLVPPAGVQALDNATATITGLIKKPGKGAFW----TDTAEDFYSVAV 281

Query: 355 SFN--------KMAKD--------------IKELHSMLDADKLS---LAKTLKEIFDIM- 388
            F          M K               I  L +ML A   +   L   L  + D++ 
Sbjct: 282 PFEGGPWAVVASMPKTEIRAVTWSVGTQLAIGSLLAMLLAVGSAMWLLRSKLAPLGDLVR 341

Query: 389 --DHLAEGDFSVRADENRHKN--KLQKTINHAIENVSKMMENLKSEITVLSDELEDVGEG 444
             + L  GD SVR + + H    +L +  N   + +S M+E+++     ++   + +   
Sbjct: 342 QAEALGAGDLSVRLNVSSHDEIGQLARAFNQMSQALSTMVEHIRKASQEVNSRAQALSGL 401

Query: 445 LKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYNDAEQSVDSAIEV 504
              A E  EQ +     +A A  + SA   + +D +  T + A               E 
Sbjct: 402 SSGAYEGMEQQSGEITSMAGAVEEFSATSLNIADNMGNTERLAQ--------------EN 447

Query: 505 KDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESKKINEVTVLIKDVAEQTGLLA 564
              +  G   ++ A  ++++I   ++     I  LG+ S++I  +  +I  +AEQT LLA
Sbjct: 448 AQQTRIGRTSMDEASSSLEQIAGALNSTATVINTLGQRSQEIGGIVGVITSIAEQTNLLA 507

Query: 565 LNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGINKKVETTIDLGLAGR 624
           LNA+IEAARAG+ G+GFAVVA E++SLA   +++ ++I+  IN I ++    I     G 
Sbjct: 508 LNAAIEAARAGEQGRGFAVVADEVRSLASRTRQATDEISSMINSIQQETGNAISTMEQGN 567

Query: 625 DEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASNNTQEALRNVQDIASISE 684
             +  G+     V +A  +I E   ++ +  A I    +  S+       N+Q IA    
Sbjct: 568 LLMQEGLSRNANVATALARIDEQSRSAGQQFAAITTATQEQSSTATLLSSNLQSIA---- 623

Query: 685 EFAATAEELTASSEEQNRAVEEIDASAEKMMEISRKLAEDADEFK 729
                      ++ EQ   V  +  +A+++ ++++ L ++ D F+
Sbjct: 624 ----------MANSEQREVVSNLALTAKELEKLAQDLRQEVDRFR 658