Pairwise Alignments
Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2
Subject, 518 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2
Score = 136 bits (343), Expect = 2e-36
Identities = 97/341 (28%), Positives = 171/341 (50%), Gaps = 30/341 (8%)
Query: 377 LAKTLKEIFDIMDHLAEGDFSVRADENRHKN--KLQKTINHAIENVSKMMENLKSEITVL 434
+ L+ ++ +A GD S NR +LQ + + N+ +++E ++S + +
Sbjct: 191 IVNPLQYTLQAVNRIARGDLSEPVQVNRRDELGQLQSGLQQMMLNLHELIEGIRSGVIQV 250
Query: 435 SDELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYNDA 494
+ E + ++ + VATA ++ +A +Q+ V DA
Sbjct: 251 ASAAEQLSAVTEQTNAGVNNQKTETDHVATAMSEMTATVQN--------------VARDA 296
Query: 495 EQSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESKKINEVTVLIK 554
E++ +A + G + V AI ++++ +++ +++ L E+S+KI V +IK
Sbjct: 297 EEASTAASAADQQASEGEQIVNEAIAQIKRLAEELNQSADAVRHLQEQSEKIGGVLDVIK 356
Query: 555 DVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGIN---- 610
VA+QT LLALNA+IEAARAG+AG+GFAVVA E++SLA ++S E+I + G+
Sbjct: 357 AVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLALRTQRSTEEIESLVAGVQSGTH 416
Query: 611 ---KKVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASN 667
+E++ LG + + R V+A++ + S V M QI A+ S
Sbjct: 417 AVASGMESSQLLGESSVEFTHRAVIALENITS-------KVSIIQAMNQQIATAAEQQSA 469
Query: 668 NTQEALRNVQDIASISEEFAATAEELTASSEEQNRAVEEID 708
+E R+V ++ ISE+ A+T EE +SS E R E++
Sbjct: 470 VAEEINRSVINVRDISEQTASTCEETASSSTELARLGHELE 510
Score = 61.2 bits (147), Expect = 1e-13
Identities = 59/331 (17%), Positives = 141/331 (42%), Gaps = 46/331 (13%)
Query: 298 IIALFGLLIAVVISLVSSRSITKPINQLEDGVHKFGSGDYDHTINVKTGDELEELANSFN 357
++A LL+ + + + ++ I P+ V++ GD + V DEL +L +
Sbjct: 171 LVAAMTLLLGALAAWIITQQIVNPLQYTLQAVNRIARGDLSEPVQVNRRDELGQLQSGLQ 230
Query: 358 KMAKDIKELHSMLDADKLSLAKTLKEIFDIMDHLAEGDFSVRADENRHKNKLQKTINHAI 417
+M ++ EL + + + +A +++ + + G + + E H + +
Sbjct: 231 QMMLNLHELIEGIRSGVIQVASAAEQLSAVTEQTNAG-VNNQKTETDHVATAMSEMTATV 289
Query: 418 ENVSKMMENLKSEITVLSDELED----VGEGLKRAKETSEQVTDAANQVATAAADQSAKL 473
+NV++ E + + + + V E + + K +E++ +A+ V +QS K+
Sbjct: 290 QNVARDAEEASTAASAADQQASEGEQIVNEAIAQIKRLAEELNQSADAV-RHLQEQSEKI 348
Query: 474 QDTSDELEKTAKAADMVYNDAEQSVDSAIEVKDNSETG--------------------VK 513
D ++ A+ +++ ++++AIE E G +
Sbjct: 349 GGVLDVIKAVAQQTNLL------ALNAAIEAARAGEAGRGFAVVADEVRSLALRTQRSTE 402
Query: 514 KVENAIDTMQKITNVIDELGKSIQELGEESKKI-NEVTVLIKDVAEQTGLL-ALNASIEA 571
++E+ + +Q T+ + +S Q LGE S + + + ++++ + ++ A+N I
Sbjct: 403 EIESLVAGVQSGTHAVASGMESSQLLGESSVEFTHRAVIALENITSKVSIIQAMNQQI-- 460
Query: 572 ARAGDAGKGFAVVASEIKSLAEEIKKSVEDI 602
A A + ++AEEI +SV ++
Sbjct: 461 ----------ATAAEQQSAVAEEINRSVINV 481
Score = 34.3 bits (77), Expect = 2e-05
Identities = 69/396 (17%), Positives = 154/396 (38%), Gaps = 46/396 (11%)
Query: 173 IYDDAGTLGYVAFIDVLNNDHTLVDSIKASTGDESTLFLENYRISTSVVSGNSRAVGTTA 232
IY G LG + +L+ L+DS A ++ + ++ +V+ + +G A
Sbjct: 132 IYKRMGQLGDL----LLDTTQKLIDSQNAKRDADAA----SAKVLLGLVAAMTLLLGALA 183
Query: 233 SDVVYNTVVKENTEFMGSANVVGQSFLTKYVPLKDSNGATIGMVFVGTPEAQFT--QLVN 290
+ ++ +V + + N + + L++ P++ + +G + G + +L+
Sbjct: 184 AWIITQQIVNPLQYTLQAVNRIARGDLSE--PVQVNRRDELGQLQSGLQQMMLNLHELIE 241
Query: 291 NARNNTIIIALFGLLIAVVISLVSSRSITKPINQLEDGVH-KFGSGDYDHTIN--VKTGD 347
R+ I +A A +S V+ ++ NQ + H + T+ + +
Sbjct: 242 GIRSGVIQVAS----AAEQLSAVTEQTNAGVNNQKTETDHVATAMSEMTATVQNVARDAE 297
Query: 348 ELEELANSFNKMAKDIKELHSMLDADKLSLAKTLKEIFDIMDHLAEGDFSVRADENRHKN 407
E A++ ++ A + +++ + A LA+ L + D + HL E + + K
Sbjct: 298 EASTAASAADQQASEGEQIVNEAIAQIKRLAEELNQSADAVRHLQEQSEKIGGVLDVIKA 357
Query: 408 KLQKT----INHAIE-----------------------NVSKMMENLKSEITVLSDELED 440
Q+T +N AIE + E ++S + +
Sbjct: 358 VAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLALRTQRSTEEIESLVAGVQSGTHA 417
Query: 441 VGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYNDAEQSVDS 500
V G++ ++ E + ++ A + ++K+ ++ A AA+ AE+ S
Sbjct: 418 VASGMESSQLLGESSVEFTHRAVIALENITSKVSIIQAMNQQIATAAEQQSAVAEEINRS 477
Query: 501 AIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSI 536
I V+D SE E + ++ + EL + +
Sbjct: 478 VINVRDISEQTASTCEETASSSTELARLGHELERLV 513