Pairwise Alignments
Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2
Subject, 536 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2
Score = 125 bits (315), Expect = 4e-33
Identities = 94/334 (28%), Positives = 178/334 (53%), Gaps = 44/334 (13%)
Query: 407 NKLQKTINHAIENVSKMME-NLKSEITVLSDELEDVGEGLK-------RAKETSEQVTDA 458
N + K I +A++ ++ + NL ITV D ++ G L+ + ++T ++++ +
Sbjct: 207 NSITKPIANALDAAEEIAKGNLTRPITV--DGSDEAGRLLRAMSTMQEKLRDTLQRISGS 264
Query: 459 ANQVATAA------ADQSAK-LQDTSDELEKTAKAADMVYNDAEQSVDSAIEVKDNSETG 511
A Q+A+AA D+SA+ L ++E+E+ A A + + + E+ +A+ + S+
Sbjct: 265 ATQLASAAEELNSVTDESARGLTQQNNEIEQAATAVNEMTSAVEEVARNAVSTSEASKNA 324
Query: 512 VKKVENAIDTMQKITNVIDELGKSIQE-------LGEESKKINEVTVLIKDVAEQTGLLA 564
+ D +Q+ + I+ + +Q L +ES+ I +V +I+ +A+QT LLA
Sbjct: 325 TTSAGDGRDLVQETVSAIERMSADVQSTAALIGNLADESRDIGKVLDVIRGLADQTNLLA 384
Query: 565 LNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGINKKVETTIDLGLAGR 624
LNA+IEAARAG+AG+GFAVVA E+++LA ++S +I R I I E +D
Sbjct: 385 LNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQSGTEHAVDSMRNST 444
Query: 625 DEVD------RGV-VAIDEVNSAFMKIKES---VETSAKMIAQIKDNAKNASNNTQEALR 674
+ + RG +++D +N+A ++I E + ++A+ AQ+ +E R
Sbjct: 445 ERAESTLNIARGAGMSLDTINTAIVEINERNLVIASAAEEQAQV----------AREVDR 494
Query: 675 NVQDIASISEEFAATAEELTASSEEQNRAVEEID 708
N+ +I +S + A A + +A+S E +R +++
Sbjct: 495 NLVNIRDLSVQSATGANQTSAASAELSRLAVDLN 528
Score = 68.6 bits (166), Expect = 8e-16
Identities = 73/362 (20%), Positives = 149/362 (41%), Gaps = 50/362 (13%)
Query: 287 QLVNNARNNTIIIALFGLLIAVVISLVSSRSITKPINQLEDGVHKFGSGDYDHTINVKTG 346
Q ++A N + + L + ++ + + + SITKPI D + G+ I V
Sbjct: 178 QQYSSAFNWVVTLLLIATGLTLLFAWLLTNSITKPIANALDAAEEIAKGNLTRPITVDGS 237
Query: 347 DE------------------LEELANSFNKMAKDIKELHSMLDADKLSL----------A 378
DE L+ ++ S ++A +EL+S+ D L A
Sbjct: 238 DEAGRLLRAMSTMQEKLRDTLQRISGSATQLASAAEELNSVTDESARGLTQQNNEIEQAA 297
Query: 379 KTLKEIFDIMDHLAEGDFSV-RADENRH------KNKLQKTINHAIENVSKMMENLKSEI 431
+ E+ ++ +A S A +N ++ +Q+T++ AIE +S +++ + I
Sbjct: 298 TAVNEMTSAVEEVARNAVSTSEASKNATTSAGDGRDLVQETVS-AIERMSADVQSTAALI 356
Query: 432 TVLSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDT-------SDELEKTA 484
L+DE D+G+ L + + D N +A AA ++A+ + +DE+ A
Sbjct: 357 GNLADESRDIGKVL----DVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALA 412
Query: 485 KAADMVYNDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESK 544
++ E+ + S ++ +E V + N+ + + N+ G S+ +
Sbjct: 413 HRTQQSTSEIERMIGS---IQSGTEHAVDSMRNSTERAESTLNIARGAGMSLDTINTAIV 469
Query: 545 KINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINR 604
+INE ++I AE+ +A D A A++ + + E+ + D+N
Sbjct: 470 EINERNLVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGANQTSAASAELSRLAVDLNN 529
Query: 605 TI 606
+
Sbjct: 530 MV 531
Score = 35.0 bits (79), Expect = 1e-05
Identities = 69/307 (22%), Positives = 126/307 (41%), Gaps = 41/307 (13%)
Query: 436 DELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYNDAE 495
D +E + ++ A+ T E++ A+++ AA DQ +L +LE+ K E
Sbjct: 81 DLVEQRSQQIRAAQTTYEKLISASDE--RAAYDQLVQLLGQYRQLEERMKTLSRNNQVDE 138
Query: 496 QSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDE-LGKSIQELGEESKKINEVTVLIK 554
E+ NS+ + AID + +I N+ E L K + + S N V L+
Sbjct: 139 LRALLNTELLSNSDA----INAAIDRLVEINNLQAEALNKGAAQ--QYSSAFNWVVTLLL 192
Query: 555 DVAEQTGLLA--LNASIEA--ARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGIN 610
T L A L SI A A DA AEEI K T++G +
Sbjct: 193 IATGLTLLFAWLLTNSITKPIANALDA--------------AEEIAKGNLTRPITVDGSD 238
Query: 611 K-----KVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNA 665
+ + +T+ L RD + R + ++ SA ++ + SA+ + Q + + A
Sbjct: 239 EAGRLLRAMSTMQEKL--RDTLQRISGSATQLASAAEELNSVTDESARGLTQQNNEIEQA 296
Query: 666 SNNTQEALRNVQDIASISEEFAATAEELTASS-------EEQNRAVEEIDASAEKMMEIS 718
+ E V+++A + + ++ T S+ +E A+E + A + +
Sbjct: 297 ATAVNEMTSAVEEVARNAVSTSEASKNATTSAGDGRDLVQETVSAIERMSADVQSTAALI 356
Query: 719 RKLAEDA 725
LA+++
Sbjct: 357 GNLADES 363