Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 712 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  129 bits (323), Expect = 7e-34
 Identities = 93/340 (27%), Positives = 167/340 (49%), Gaps = 30/340 (8%)

Query: 377 LAKTLKEIFDIMDHLAEGD-------FSVRADENRHKNKLQKTINHAIENVSKMMENLKS 429
           +A+ LK++  ++D +A+G+        S RADE      + +  N  +  +  M+  + +
Sbjct: 383 IARPLKQMVAMLDDIAQGEGDLTRRLVSDRADE---LGAIARGFNTFLSKLQGMITQVVT 439

Query: 430 EITVLSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADM 489
            +  +SD  E   +   R  +   +     +QVATA  + +A  QD +    + A+AA  
Sbjct: 440 SVQSVSDSSEHTADIAIRTNQGVHKQMSEIDQVATAVHEMTATAQDVARNATQAAQAA-- 497

Query: 490 VYNDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSI---QELGEESKKI 546
             + A+Q+    +++               DT   I  +  E+GK++   Q L ++S+ I
Sbjct: 498 --SHADQAASQGMQI-------------VRDTSTSIGALAVEIGKAVGVVQTLAKDSENI 542

Query: 547 NEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTI 606
           N +   I+ +AEQT LLALNA+IEAARAG+ G+GFAVVA E+++LA++ +++ E+I   I
Sbjct: 543 NAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQTMI 602

Query: 607 NGINKKVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNAS 666
             + +     + +    +   D  V    +   A   I ++V     M  QI   A+  S
Sbjct: 603 QQLQQGTRDVVRVMEDSQTRTDESVQHAAKAAQALETITQAVSVINDMNTQIASAAEEQS 662

Query: 667 NNTQEALRNVQDIASISEEFAATAEELTASSEEQNRAVEE 706
               +  RNV +I  ++ E A+ A+E +A+S    +  E+
Sbjct: 663 AVADDINRNVINIGQVANEVASGADESSAASAGLTKLAEQ 702



 Score = 45.8 bits (107), Expect = 7e-09
 Identities = 67/367 (18%), Positives = 135/367 (36%), Gaps = 80/367 (21%)

Query: 297 IIIALFGLLIAVVISLVSSRSITKPINQLEDGVHKFGSGDYDHTINVKTGDELEELANSF 356
           ++IA  GLL+  ++    +R + + +  L+D     G GD    +     DEL  +A  F
Sbjct: 366 LVIAGIGLLVIWLVGHGIARPLKQMVAMLDDIAQ--GEGDLTRRLVSDRADELGAIARGF 423

Query: 357 NKMAKDIKELHSMLDADKLSLAKTLKEIFDIMDHLAEGDFSVRADENRHKNKLQKTINHA 416
           N     + +L  M+      +  +++ + D  +H A  D ++R ++  HK   +      
Sbjct: 424 NTF---LSKLQGMIT----QVVTSVQSVSDSSEHTA--DIAIRTNQGVHKQMSE------ 468

Query: 417 IENVSKMMENLKSEITVLSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDT 476
                  ++ + + +  ++   +DV     +A + +     AA+Q      D S  +   
Sbjct: 469 -------IDQVATAVHEMTATAQDVARNATQAAQAASHADQAASQGMQIVRDTSTSIGAL 521

Query: 477 SDELEKTAKAADMVYNDAEQ------------------SVDSAIEVKDNSETG------V 512
           + E+ K       +  D+E                   ++++AIE     E G       
Sbjct: 522 AVEIGKAVGVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVA 581

Query: 513 KKVENAIDTMQKITNVIDEL----------------------GKSIQELGEESKKINEVT 550
            +V N     Q+ T  I  +                       +S+Q   + ++ +  +T
Sbjct: 582 DEVRNLAQKTQQATEEIQTMIQQLQQGTRDVVRVMEDSQTRTDESVQHAAKAAQALETIT 641

Query: 551 VLIKDVAEQTGLLALNASIEAARAGDAGKG---FAVVASEIKSLAEE-------IKKSVE 600
             +  + +    +A  A  ++A A D  +       VA+E+ S A+E       + K  E
Sbjct: 642 QAVSVINDMNTQIASAAEEQSAVADDINRNVINIGQVANEVASGADESSAASAGLTKLAE 701

Query: 601 DINRTIN 607
              R IN
Sbjct: 702 QQRRLIN 708