Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 640 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  135 bits (340), Expect = 6e-36
 Identities = 86/326 (26%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 377 LAKTLKEIFDIMDHLAEGDFSVRADENRHKNKLQKTINHAIENVSKMMENLKSEITVLSD 436
           + + L++   ++D +A GD +            Q T+    + +  + + ++   T L D
Sbjct: 313 ITRPLQDTLAVVDRIAAGDLT------------QGTVVTRGDELGVLQQGIQRMGTTLRD 360

Query: 437 ELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYNDAEQ 496
            +  + +G+ +    +E+++    Q +     Q  +    +  +++ +     V  +AEQ
Sbjct: 361 LIGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKTETDQVATAMQEMSATVHEVARNAEQ 420

Query: 497 SVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESKKINEVTVLIKDV 556
           +   A E    +  G + V  AI  ++++ + +     ++ EL +ES +I ++  +I+ V
Sbjct: 421 ACTVASEADAQARIGDQVVAQAIVQIERLASEVGRSVDAMDELEQESARIGKIMDVIRAV 480

Query: 557 AEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGINKKVETT 616
           AEQT LLALNA+IEAARAGDAG+GFAVVA E++ LA+  + S E+I   + G+       
Sbjct: 481 AEQTNLLALNAAIEAARAGDAGRGFAVVADEVRGLAQRTQHSTEEIESLVAGLQNGTRQV 540

Query: 617 IDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASNNTQEALRNV 676
             +    R+  D  V    +   +   I ++V     M  QI   A   S+  +E  R++
Sbjct: 541 SSIMRNSRELTDSSVELAGKAGISLGNITQAVSGIQAMNQQIAAAAVQQSSVAEEISRSI 600

Query: 677 QDIASISEEFAATAEELTASSEEQNR 702
            ++  +SE+ A+ +EE  ASS E  R
Sbjct: 601 LNVRDVSEQTASASEETAASSIELAR 626



 Score = 32.7 bits (73), Expect = 6e-05
 Identities = 70/413 (16%), Positives = 149/413 (36%), Gaps = 53/413 (12%)

Query: 359 MAKDIKELHSMLDADKLSLAKTLKEIFDIMDHLAEGDFSVRADENRHKNKLQKTINHAIE 418
           +AK I ++ +M   D+    +  + I    + +A   + VR       +  ++     +E
Sbjct: 148 IAKVINDVEAMPATDERRF-ELYRIILKAKEDVALVRYEVRGYTGNPNSATEQAATRQLE 206

Query: 419 NVSKMMENLKSEI-TVLSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTS 477
           N  K +E L        +D ++ +   L   + + +  T A+NQ    A   +  L +T 
Sbjct: 207 NALKSIETLNGAFGPSYADTIKQLETALIAYRRSVQNFT-ASNQAIGKAVQDTIDLGETI 265

Query: 478 DELEKTAKAADMVYNDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKITN-------VID 530
             L     A+ +V    E +    +++   +   +  +  A+   ++IT        V+D
Sbjct: 266 TRLTDEMYASQLVSLGDESAQSRILQLSCTALAMLLGILAAMIITRQITRPLQDTLAVVD 325

Query: 531 ELGKSIQELGEESKKINEVTVLIKDVAEQTGLLALNASIEAARAG--DAGKGFAVVASEI 588
            +       G    + +E+ VL      Q G+  +  ++     G  D     A  A E+
Sbjct: 326 RIAAGDLTQGTVVTRGDELGVL------QQGIQRMGTTLRDLIGGIRDGVTQIASAAEEL 379

Query: 589 KSLAEE--------------IKKSVEDINRTINGINKKVETTIDLGLAG----------- 623
            ++ E+              +  ++++++ T++ + +  E    +               
Sbjct: 380 SAVTEQTSAGVNSQKTETDQVATAMQEMSATVHEVARNAEQACTVASEADAQARIGDQVV 439

Query: 624 ----------RDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASNNTQEAL 673
                       EV R V A+DE+     +I + ++    +  Q    A NA+     A 
Sbjct: 440 AQAIVQIERLASEVGRSVDAMDELEQESARIGKIMDVIRAVAEQTNLLALNAAIEAARAG 499

Query: 674 RNVQDIASISEEFAATAEELTASSEEQNRAVEEIDASAEKMMEISRKLAEDAD 726
              +  A +++E    A+    S+EE    V  +     ++  I R   E  D
Sbjct: 500 DAGRGFAVVADEVRGLAQRTQHSTEEIESLVAGLQNGTRQVSSIMRNSRELTD 552