Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 612 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  119 bits (298), Expect = 5e-31
 Identities = 113/448 (25%), Positives = 191/448 (42%), Gaps = 93/448 (20%)

Query: 273 IGMVFVGTPEAQFTQLVNNARNNTIIIALFGLLIAVVISLVS---SRSITKPINQLEDGV 329
           +G  ++G  E   +++++ A   T +  L    + V+ +LV+   S+SI KPI+Q+  G+
Sbjct: 237 LGWRYIGLIER--SEVMSAATRMTYLTTLIVGGLTVIFALVAVAFSKSIVKPISQVSTGL 294

Query: 330 HKF--GSGDYDHTINVKTGDELEELANSFNKMAKDIKELHSMLDADKLSLAKTLKEIFDI 387
                G GD    +  +  DE  ELA  FNK    I++L                     
Sbjct: 295 QSIAQGEGDLRRELEFQGNDETAELAGWFNKFLSAIRQL--------------------- 333

Query: 388 MDHLAEGDFSVRADENRHKNKLQKTINHAIENVSKMMENLKSEITVLSDELEDVGEGLKR 447
                                    I H    +     NL++   V S+   ++ E   R
Sbjct: 334 -------------------------IQH----IGAASSNLQNASRVNSEVANNMNEAAGR 364

Query: 448 AKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYNDAEQSVDSAIEVKDN 507
            +E  E V+ A N++   A                         N+  +S   A E  +N
Sbjct: 365 QREAVELVSTAFNEMVATA-------------------------NEVARSCSGAAESAEN 399

Query: 508 SE----TGVKKVENAIDTMQKITNVIDELGKSIQELGEESKKINEVTVLIKDVAEQTGLL 563
                  G +++E   D + ++   + E  +S+ EL   S+ IN++   I+ +AEQT LL
Sbjct: 400 GHRRVAEGKQQIEITTDNVNRLGRRLTESSQSMTELEAGSRSINQILGTIRAIAEQTNLL 459

Query: 564 ALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGINKKVETTIDLGLAG 623
           ALNA+IEAARAGD G+GFAVVA E+++LA+    S  +I + +  +  K +  +    + 
Sbjct: 460 ALNAAIEAARAGDQGRGFAVVADEVRALAKRTSDSTGEIEQLLGALGSKTQEVMGKMGSC 519

Query: 624 RDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASNNTQEALRNVQDI---A 680
            +     V +I+    +F  I+ SV        QI   A+   +  +E  R++Q I   A
Sbjct: 520 LELSHASVSSIESTRDSFEGIQLSVNEIRDQNLQISAAAEEQHSVAEEINRHIQQIYDEA 579

Query: 681 SISEEFAATAEE----LTASSEEQNRAV 704
            + E  A +A++    L++ S+E N  V
Sbjct: 580 RLVESLANSAQDDSGKLSSLSDELNGLV 607