Pairwise Alignments
Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2
Subject, 541 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3
Score = 125 bits (315), Expect = 4e-33
Identities = 95/335 (28%), Positives = 177/335 (52%), Gaps = 44/335 (13%)
Query: 407 NKLQKTINHAIENVSKMME-NLKSEITVLSDELEDVGEGLK-------RAKETSEQVTDA 458
N + K I +A++ ++ + NL ITV D ++ G L+ + ++T ++++ +
Sbjct: 212 NSITKPIANALDAAEEIAKGNLTRPITV--DGSDEAGRLLRAMSTMQEKLRDTLQRISGS 269
Query: 459 ANQVATAA------ADQSAK-LQDTSDELEKTAKAADMVYNDAEQSVDSAIEVKDNSETG 511
A Q+A+AA D+SA+ L ++E+E+ A A + + + E+ +A+ + S+
Sbjct: 270 ATQLASAAEELNAVTDESARGLTQQNNEIEQAATAVNEMTSAVEEVARNAVSTSEASKHA 329
Query: 512 VKKVENAIDTMQKITNVIDELGKSIQE-------LGEESKKINEVTVLIKDVAEQTGLLA 564
+ D +Q+ I+ + +Q L ES+ I +V +I+ +A+QT LLA
Sbjct: 330 TTSAGDGRDLVQETVGAIERMSADVQSTATLIGNLANESRDIGKVLDVIRGLADQTNLLA 389
Query: 565 LNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGINKKVETTIDLGLAGR 624
LNA+IEAARAG+AG+GFAVVA E+++LA ++S +I R I I E +D
Sbjct: 390 LNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQSGTEHAVDSMRNST 449
Query: 625 DEVD------RGV-VAIDEVNSAFMKIKES---VETSAKMIAQIKDNAKNASNNTQEALR 674
+ + RG +++D +N+A ++I E + ++A+ AQ+ +E R
Sbjct: 450 ERAESTLNIARGAGLSLDTINTAIVEINERNLVIASAAEEQAQV----------AREVDR 499
Query: 675 NVQDIASISEEFAATAEELTASSEEQNRAVEEIDA 709
N+ +I +S + A A + TA+S E +R ++++
Sbjct: 500 NLVNIRDLSVQSATGANQTTAASAELSRLAVDLNS 534
Score = 64.3 bits (155), Expect = 2e-14
Identities = 66/362 (18%), Positives = 144/362 (39%), Gaps = 50/362 (13%)
Query: 287 QLVNNARNNTIIIALFGLLIAVVISLVSSRSITKPINQLEDGVHKFGSGDYDHTINVKTG 346
Q ++A N + + + + ++ + + + SITKPI D + G+ I V
Sbjct: 183 QQYSSAFNWVVALLVIATGLTLLFAWLLTNSITKPIANALDAAEEIAKGNLTRPITVDGS 242
Query: 347 DELEELANSFNKMAKDIKELHSMLDADKLSLAKTLKEIFDIMDHLAEG------------ 394
DE L + + M + +++ + LA +E+ + D A G
Sbjct: 243 DEAGRLLRAMSTMQEKLRDTLQRISGSATQLASAAEELNAVTDESARGLTQQNNEIEQAA 302
Query: 395 ---------------DFSVRADENRH--------KNKLQKTINHAIENVSKMMENLKSEI 431
+ ++ ++H ++ +Q+T+ AIE +S +++ + I
Sbjct: 303 TAVNEMTSAVEEVARNAVSTSEASKHATTSAGDGRDLVQETVG-AIERMSADVQSTATLI 361
Query: 432 TVLSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDT-------SDELEKTA 484
L++E D+G+ L + + D N +A AA ++A+ + +DE+ A
Sbjct: 362 GNLANESRDIGKVL----DVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALA 417
Query: 485 KAADMVYNDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESK 544
++ E+ + S ++ +E V + N+ + + N+ G S+ +
Sbjct: 418 HRTQQSTSEIERMIGS---IQSGTEHAVDSMRNSTERAESTLNIARGAGLSLDTINTAIV 474
Query: 545 KINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINR 604
+INE ++I AE+ +A D A A++ + + E+ + D+N
Sbjct: 475 EINERNLVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGANQTTAASAELSRLAVDLNS 534
Query: 605 TI 606
+
Sbjct: 535 MV 536
Score = 34.3 bits (77), Expect = 2e-05
Identities = 70/307 (22%), Positives = 125/307 (40%), Gaps = 41/307 (13%)
Query: 436 DELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYNDAE 495
D LE + ++ A+ T E++ A+++ AA DQ +L +LE+ K E
Sbjct: 86 DLLEQRSQQIRAAQTTYEKLISASDE--RAAYDQYVQLLGQYRQLEERMKTLSRNNQVDE 143
Query: 496 QSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDE-LGKSIQELGEESKKINEVTVLIK 554
E+ NS+ + AID + +I N+ E L K + + S N V L+
Sbjct: 144 LRALLNTELLSNSDA----INAAIDHLVEINNLQAEALNKGAAQ--QYSSAFNWVVALLV 197
Query: 555 DVAEQTGLLA--LNASIEA--ARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGIN 610
T L A L SI A A DA AEEI K T++G +
Sbjct: 198 IATGLTLLFAWLLTNSITKPIANALDA--------------AEEIAKGNLTRPITVDGSD 243
Query: 611 K-----KVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNA 665
+ + +T+ L RD + R + ++ SA ++ + SA+ + Q + + A
Sbjct: 244 EAGRLLRAMSTMQEKL--RDTLQRISGSATQLASAAEELNAVTDESARGLTQQNNEIEQA 301
Query: 666 SNNTQEALRNVQDIASISEEFAATAEELTASS-------EEQNRAVEEIDASAEKMMEIS 718
+ E V+++A + + ++ T S+ +E A+E + A + +
Sbjct: 302 ATAVNEMTSAVEEVARNAVSTSEASKHATTSAGDGRDLVQETVGAIERMSADVQSTATLI 361
Query: 719 RKLAEDA 725
LA ++
Sbjct: 362 GNLANES 368