Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 676 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  118 bits (296), Expect = 9e-31
 Identities = 97/350 (27%), Positives = 168/350 (48%), Gaps = 28/350 (8%)

Query: 376 SLAKTLKEIFDIMDHLAEGDFSVR--ADENRHKNKLQKTINHAIENVSKMMENLKSEITV 433
           S   +L+ +  IMD +A GD + R          +L +  N  +  V +++E +   +  
Sbjct: 348 STRASLRSLGKIMDKVAAGDMTARYQVQSRDELGELGQVFNTTVAQVRELIERVGQTVAE 407

Query: 434 LSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYND 493
           +  + + V      + +T  +      QVATA  + SA  Q+              V + 
Sbjct: 408 VDRQAQRVESVSGESNQTVSEQRGQIEQVATAMNEMSATAQE--------------VASS 453

Query: 494 AEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESKKINEVTVLI 553
           AE +V SA  V + + +G   V   +  +Q++ + I++  + I +L  +SK I++V  +I
Sbjct: 454 AEAAVGSAQSVNEETVSGRALVVAQVGGIQRLASEIEQSVQVINQLAGDSKAISQVLDVI 513

Query: 554 KDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTI----NGI 609
           K +AEQT LLALNA+IEAARAG+ G+GFAVVA E++ LA+  +KS  +I + I    NG+
Sbjct: 514 KTIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRGLAQRTQKSTAEIEQMIARLQNGV 573

Query: 610 NKKVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASNNT 669
              V+T         D V +      +V  A   I  +V     ++ Q +  A  A   T
Sbjct: 574 GAAVKTMHASHALAEDTVGQS----GQVEQALENILGAV---GLIVDQNQQIAAAAEQQT 626

Query: 670 QEALRNVQDIASISEEFAATAEELTASSEEQNRAVEEIDASAEKMMEISR 719
             A    ++I +I+E    TAE     +E+ +R + ++    ++++   R
Sbjct: 627 AVAHDIDRNIVAINEAGQRTAEG-AGHTEQASRELSQLVGRLQQLISAFR 675