Pairwise Alignments
Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2
Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2
Score = 129 bits (324), Expect = 4e-34
Identities = 86/333 (25%), Positives = 167/333 (50%), Gaps = 12/333 (3%)
Query: 376 SLAKTLKEIFDIMDHLAEGDFSVRADENRHKNKLQKTINHAIENVSKMMENLKSEITVLS 435
S+++ L+E+ +A GD S R R K++ ++++ ++++ L
Sbjct: 211 SISRPLEELKQAAASVAAGDLS-RTIACRGKDE-----------ITEVQQSIRQMQQTLR 258
Query: 436 DELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYNDAE 495
D L+D+ + +E++ A Q+ ++Q + + + + A D V +A
Sbjct: 259 DTLQDIQGSATQLASAAEELHAVTQHTAQGIHQQNEEVQMAATAVTEMSAAVDEVAGNAN 318
Query: 496 QSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESKKINEVTVLIKD 555
++ D++ + + ++ G ++V T+ +++ + + ++ L EE+ I +V +I+
Sbjct: 319 RTSDASRDAETVADDGRRQVTATRQTIDQLSEKLQQTAGTVTRLAEEAASIGQVVDVIRA 378
Query: 556 VAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGINKKVET 615
+A+QT LLALNA+IEAARAG+AG+GFAVVA E+++LA+ + S ++I R I I E
Sbjct: 379 IADQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQSSTQEIERMIGAIQSATEQ 438
Query: 616 TIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASNNTQEALRN 675
++ + R E + A I E V +M I A+ + +E RN
Sbjct: 439 SVRDMQQSSEFATRSQTMAGEADQALGLIAERVGQINEMNLVIASAAEEQAQVAREVDRN 498
Query: 676 VQDIASISEEFAATAEELTASSEEQNRAVEEID 708
+ I ISE+ A A++ + +S+E R ++
Sbjct: 499 LVAIRDISEQSATGAQQTSVASDELARLATHLN 531
Score = 71.6 bits (174), Expect = 9e-17
Identities = 70/375 (18%), Positives = 154/375 (41%), Gaps = 55/375 (14%)
Query: 278 VGTPEAQFTQLVNNARNNTIIIALFGLLIAVVI-----SLVSSRSITKPINQLEDGVHKF 332
+G +A++ + + N ++ GLL+A++I ++V RSI++P+ +L+
Sbjct: 169 LGEAKAEYDEALALYERNRVLN--IGLLLALLIGGGLFAMVLLRSISRPLEELKQAAASV 226
Query: 333 GSGDYDHTINVKTGDELEELANSFNKMAKDIKELHSMLDADKLSLAKTLKEIFDIMDHLA 392
+GD TI + DE+ E+ S +M + +++ + LA +E+ + H A
Sbjct: 227 AAGDLSRTIACRGKDEITEVQQSIRQMQQTLRDTLQDIQGSATQLASAAEELHAVTQHTA 286
Query: 393 EG----------------DFSVRADE-----NRHKN-------------KLQKTINHAIE 418
+G + S DE NR + + I+
Sbjct: 287 QGIHQQNEEVQMAATAVTEMSAAVDEVAGNANRTSDASRDAETVADDGRRQVTATRQTID 346
Query: 419 NVSKMMENLKSEITVLSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSD 478
+S+ ++ +T L++E +G+ + + D N +A AA ++A+ +
Sbjct: 347 QLSEKLQQTAGTVTRLAEEAASIGQ----VVDVIRAIADQTNLLALNAAIEAARAGEAG- 401
Query: 479 ELEKTAKAADMVYNDAEQSVDSAIE-------VKDNSETGVKKVENAIDTMQKITNVIDE 531
A AD V N A+++ S E ++ +E V+ ++ + + + + E
Sbjct: 402 --RGFAVVADEVRNLAQRTQSSTQEIERMIGAIQSATEQSVRDMQQSSEFATRSQTMAGE 459
Query: 532 LGKSIQELGEESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSL 591
+++ + E +INE+ ++I AE+ +A D + A A +
Sbjct: 460 ADQALGLIAERVGQINEMNLVIASAAEEQAQVAREVDRNLVAIRDISEQSATGAQQTSVA 519
Query: 592 AEEIKKSVEDINRTI 606
++E+ + +N+ +
Sbjct: 520 SDELARLATHLNQLV 534
Score = 34.7 bits (78), Expect = 1e-05
Identities = 63/307 (20%), Positives = 110/307 (35%), Gaps = 55/307 (17%)
Query: 436 DELEDVGEGLKRAKETSEQVTDAANQVATAAAD-QSAKLQDTS----DELEKTAKAADMV 490
D G+ + + V +A ++ D S KL + LE KAAD
Sbjct: 67 DTTHKTRSGMLTYGQARDDVRNARGEIRRLWGDFMSTKLIEAERRVVTRLEGLMKAADAP 126
Query: 491 YNDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQEL-----GEESKK 545
+D E+ +D E + A + + +ID + + EL GE +
Sbjct: 127 LDDLERILDRHSEKR-----------LAAFVVNDLYPLIDPISEGFSELIHLQLGEAKAE 175
Query: 546 INEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVE----- 600
+E L + LN + A G V+ I EE+K++
Sbjct: 176 YDEALALYERNR------VLNIGLLLALLIGGGLFAMVLLRSISRPLEELKQAAASVAAG 229
Query: 601 DINRTINGINKKVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKD 660
D++RTI G+DE+ +I ++ + ++ SA +A +
Sbjct: 230 DLSRTI-------------ACRGKDEITEVQQSIRQMQQTLRDTLQDIQGSATQLASAAE 276
Query: 661 NAKNASNNTQEALRNVQDIASISEEFAATAEELTASSEEQNRAVEEIDASAEKMMEISRK 720
+ +T Q I +EE A +T E + AV+E+ +A + + SR
Sbjct: 277 ELHAVTQHT------AQGIHQQNEEVQMAATAVT----EMSAAVDEVAGNANRTSDASRD 326
Query: 721 LAEDADE 727
AD+
Sbjct: 327 AETVADD 333