Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  137 bits (345), Expect = 1e-36
 Identities = 89/313 (28%), Positives = 160/313 (51%), Gaps = 18/313 (5%)

Query: 391 LAEGDFSVRADENRHKNKLQKTINHAIE----NVSKMMENLKSEITVLSDELEDVGEGLK 446
           +A+GD S   D +   N    T+ +A E    N+ ++++ + S +T LS  +E++ +   
Sbjct: 227 IAKGDLSQTMDRSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISN 286

Query: 447 RAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYNDAEQSVDSAIEVKD 506
           ++ +  ++      QVATA A   A + D              V  + E S   A+    
Sbjct: 287 QSADGMKEQQYQITQVATAMAQMKAAVAD--------------VARNTEDSASQAMAANH 332

Query: 507 NSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESKKINEVTVLIKDVAEQTGLLALN 566
            S+ G ++  + + ++Q++ ++I E G+++ EL ++S +IN V  +I+ +A+QT LLALN
Sbjct: 333 KSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALN 392

Query: 567 ASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGINKKVETTIDLGLAGRDE 626
           A+IEAARAG++G+GFAVVA E+++LA   + S  +I   I  +    +   D     R  
Sbjct: 393 AAIEAARAGESGRGFAVVADEVRTLAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSS 452

Query: 627 VDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASNNTQEALRNVQDIASISEEF 686
           +D+ V   +   S  + I+ES+   A +  QI        +   E  RNV++I   S+E 
Sbjct: 453 IDKCVEQGNHSQSLMISIEESIANIADVGTQIASACSEQDSVADELSRNVENIHLASQEV 512

Query: 687 AATAEELTASSEE 699
           A  +++   +  E
Sbjct: 513 AQGSQQTAQACRE 525



 Score = 25.4 bits (54), Expect = 0.008
 Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 3/79 (3%)

Query: 401 DENRHKNKLQKTINHAIENVSKMMENLKS---EITVLSDELEDVGEGLKRAKETSEQVTD 457
           ++  H   L  +I  +I N++ +   + S   E   ++DEL    E +  A +   Q + 
Sbjct: 458 EQGNHSQSLMISIEESIANIADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQ 517

Query: 458 AANQVATAAADQSAKLQDT 476
              Q        +  LQDT
Sbjct: 518 QTAQACRELTQLAVSLQDT 536