Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 537 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  129 bits (325), Expect = 3e-34
 Identities = 88/326 (26%), Positives = 164/326 (50%), Gaps = 18/326 (5%)

Query: 387 IMDHLAEGDFSVRADENRHKNKLQKTINHAIENVSKMMENLKSEITVLSDELEDVGEGLK 446
           I D +A G+ S    E+R +++    I     +++ M  +L+S I V+     DV    +
Sbjct: 219 IADSIAHGNLSEPIAESRGRDEASMLIR----SLAIMQRDLRSMIEVVRSNANDVSGMSR 274

Query: 447 RAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYNDAEQSVDSAIEVKD 506
           +      +V D++ Q ++AA   SA   + +  +E+  + A        Q+++ A + + 
Sbjct: 275 QLSSGCHEVADSSRQQSSAAGTMSAATSEMTASIEEITRHAG-------QALEMASQAES 327

Query: 507 NSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESKKINEVTVLIKDVAEQTGLLALN 566
            ++ G + +   +  M  I     +  + I+ L ++S+ I  +  +IK +A+QT LLALN
Sbjct: 328 LAKNGGRVIHQVVSDMDSIARSAQQSAQVIRTLDKDSEGIFNIIQVIKGIADQTNLLALN 387

Query: 567 ASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGINKKVETTIDLGLAGRDE 626
           A+IEAARAG+ G+GFAVVA E++SLA     S ++I   +  I +     +    AG  +
Sbjct: 388 AAIEAARAGEQGRGFAVVADEVRSLAGRTSASTQEITAMVARIQQSTREAVTSMEAGVAQ 447

Query: 627 VDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASNNTQEALRNVQDIASISE-- 684
           VD+G+    EV  A   I  +  ++ +++  I       S  + E    V+ IAS+SE  
Sbjct: 448 VDKGMAVTAEVERAISDILAATLSTTQLVNDITRTIGEQSLASNEIAHQVEMIASMSEGN 507

Query: 685 -----EFAATAEELTASSEEQNRAVE 705
                + A+T +EL+  + + +++V+
Sbjct: 508 SRVIGQTASTTDELSVMAGQLSQSVD 533