Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 540 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer:CHASE3 from Pseudomonas syringae pv. syringae B728a

 Score =  130 bits (328), Expect = 1e-34
 Identities = 87/322 (27%), Positives = 161/322 (50%), Gaps = 15/322 (4%)

Query: 376 SLAKTLKEIFDIMDHLAEGDFSVRADENRHKNKLQKTINHAIENVSKMMENLKSEITVLS 435
           S    L+   D    +A G      D + H ++L K  +       +M   L+  I  +S
Sbjct: 215 STTARLQLAIDAATAIANGKLDTVIDTSSH-DELPKAFD-------RMQNRLREMIQQIS 266

Query: 436 DELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYNDAE 495
                +   +++    SEQ++ A  + +T+A+  +A +++ +  +   ++ AD  +  A 
Sbjct: 267 QAANQLVVAVQQISGASEQLSGAIQEQSTSASAMAATIEELTVSIHHVSENADEAHELAS 326

Query: 496 QSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESKKINEVTVLIKD 555
           +S          S+ G + +EN + +M  I   +      +  LG+ S+ I+ +  +I+ 
Sbjct: 327 RS-------GQQSKDGAQVIENTLSSMNGIARTVQLSSTQVAGLGQHSEHISSIVSVIQG 379

Query: 556 VAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGINKKVET 615
           +A+QT LLALNA+IEAARAG+ G+GFAVVA E++ LA+   KS ++I   I  I   V  
Sbjct: 380 IADQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQNTGKSTKEIAGMIEKIQAGVRE 439

Query: 616 TIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASNNTQEALRN 675
           T++   +G  EV+ GV        A ++I++S     +++ QI    +  +  +Q+  RN
Sbjct: 440 TVESMRSGVQEVNEGVEMAGTAGQAIIEIRDSSGKVLQVVDQISFALREQTAASQDVARN 499

Query: 676 VQDIASISEEFAATAEELTASS 697
           V+  A ++E+   + +EL  +S
Sbjct: 500 VERSAQMAEQNNISVQELLKTS 521