Pairwise Alignments
Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2
Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4
Score = 139 bits (350), Expect = 4e-37
Identities = 82/337 (24%), Positives = 166/337 (49%), Gaps = 18/337 (5%)
Query: 376 SLAKTLKEIFDIMDHLAEGDFSVR----ADENRHKNKLQKTINHAIENVSKMMENLKSEI 431
S+++ + ++ D++ + +G+ +R + N +L K N IE + + +
Sbjct: 308 SVSQPIAKVADMLQDIGQGEGDLRQRLPVEGNDELAQLAKGFNSFIEKIQHSIIEVTDTS 367
Query: 432 TVLSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVY 491
LS +DV ++ ++ S+ D V TA + A + + +
Sbjct: 368 VQLSHAAKDVANQAQQTQDDSQLQKDQTMMVVTAINEMGATVHE--------------IA 413
Query: 492 NDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESKKINEVTV 551
+A Q+ D+A + + S G V A DT+ +++ ++++G I+ L + I +
Sbjct: 414 GNAAQAADNAKDADNASSNGQIVVTRARDTINQLSQDVEQVGNVIESLATHTTSIGSILD 473
Query: 552 LIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGINK 611
+I+ V++QT LLALNA+IEAARAG+AG+GFAVVA E+++LA S +++ + I+ +
Sbjct: 474 VIRAVSDQTNLLALNAAIEAARAGEAGRGFAVVAEEVRNLASRTAASTDEVQKMIDNLQS 533
Query: 612 KVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASNNTQE 671
+ ++ + GV A+DE + +I + + M Q+ + S ++
Sbjct: 534 EAARAVEAMTQSKSRSQEGVQAVDEASHTLTEISQQIGAITDMNIQVAAATEEQSTVVED 593
Query: 672 ALRNVQDIASISEEFAATAEELTASSEEQNRAVEEID 708
RNV +I+ I++ + T++ + +S+ N+ +D
Sbjct: 594 INRNVTEISEITQRTSETSQAVAQASQSLNQLAHRLD 630
Score = 67.4 bits (163), Expect = 2e-15
Identities = 116/678 (17%), Positives = 254/678 (37%), Gaps = 93/678 (13%)
Query: 1 MKLGTKKIGTKLLIFSIITVIIPIAILGIVSNNTITQDMKEQSADKLESSNEMANTIMDS 60
MKL I K+L+ + V++ ++G++S + + ++++ ++E+ NT+
Sbjct: 1 MKLNMLTIKQKILLTVTVAVLLSTVLVGVLSQRSAKEVVEQRML-----TSELPNTLQAI 55
Query: 61 RFTELCTLAEYASYTQGVKTS--IKTGNVDDLELRAETLKSASNADLVIFTGNGGSTIAS 118
R +A + + + +S +K V+ E L A D+ ++ A
Sbjct: 56 RNKVEMDIATLMNAAEQLASSKMLKQWLVEGRPAETEPLVIAQLKDVQQQYKLVQASYAD 115
Query: 119 SSGEGITLDSTILKVSKSSEKSGFEKIPEQTALKFSDADVTGTDSALSIVVAYPIYDDAG 178
L++ + F + + T + + + + Y +D G
Sbjct: 116 RQTAAYYTQDGFLRILTPDQDGWFFNYKNSGTERMLNV-FTEANGEVKLFINYQQPNDRG 174
Query: 179 TLGYVAFIDVLNNDHTLVDSIKASTGDESTLFLENYRISTSVVSGNSRAVGTTASDVVYN 238
+G +D + L+ S K D ++L + + + S S+ + S +
Sbjct: 175 LVGLAKSLDDMVR---LLKSFKIE--DTGFVYLVDAKGDVKLHSDTSQIGKASLSSLYGG 229
Query: 239 TVVKE----------NTEFMGSANVVGQSFLTKYVPLKDSNGATIGMVFVGTPEAQFTQL 288
V +E TE G +V S Y+P D + P A+ L
Sbjct: 230 NVTRELLNKGDFGLTQTELDGETLLVASS----YIPSMD------WYLVAQVPRAEVFAL 279
Query: 289 VNNARNNTIIIALFGLLIAVVISLVSSRSITKPINQLEDGVHKFGSGDYD--HTINVKTG 346
+ + ++ + + +S S S+++PI ++ D + G G+ D + V+
Sbjct: 280 LEESAYQILVWTVLIAAAFIGLSTFVSASVSQPIAKVADMLQDIGQGEGDLRQRLPVEGN 339
Query: 347 DELEELANSFNKMAKDIKELHSMLDADKLSLAKTLKEIFDIMDHLAEGDFSVRADENRHK 406
DEL +LA FN + I+ HS+++ S+
Sbjct: 340 DELAQLAKGFNSFIEKIQ--HSIIEVTDTSV----------------------------- 368
Query: 407 NKLQKTINHAIENVSKMMENLKSEITVLSDELEDVGEGLKRAKETSEQVTDAANQVATAA 466
++HA ++V+ + + + + D+ V + T ++ A Q A A
Sbjct: 369 -----QLSHAAKDVANQAQQTQDDSQLQKDQTMMVVTAINEMGATVHEIAGNAAQAADNA 423
Query: 467 ADQSAKLQDTSDELEKTAKAADMVYNDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKIT 526
D + + + + + D EQ V + IE T + + + I + T
Sbjct: 424 KDADNASSNGQIVVTRARDTINQLSQDVEQ-VGNVIESLATHTTSIGSILDVIRAVSDQT 482
Query: 527 NVI-----------DELGKSIQELGEESKKINEVTVLIKDVAEQTGLLALNASIEAARAG 575
N++ E G+ + EE + + T D ++ + N EAARA
Sbjct: 483 NLLALNAAIEAARAGEAGRGFAVVAEEVRNLASRTAASTDEVQK---MIDNLQSEAARAV 539
Query: 576 DAGKGFAVVASEIKSLAEEIKKSVEDINRTINGINKKVETTIDLGLAGRDEVDRGVVAID 635
+A ++ KS ++E ++V++ + T+ I++++ D+ + + ++
Sbjct: 540 EA-------MTQSKSRSQEGVQAVDEASHTLTEISQQIGAITDMNIQVAAATEEQSTVVE 592
Query: 636 EVNSAFMKIKESVETSAK 653
++N +I E + +++
Sbjct: 593 DINRNVTEISEITQRTSE 610