Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis JJ

 Score =  236 bits (603), Expect = 2e-66
 Identities = 136/379 (35%), Positives = 220/379 (58%), Gaps = 22/379 (5%)

Query: 6   KKIGTKLLIFSIITVIIPIAILGIVSNNTITQDMKEQSADKLESSNEMANTIMDSRFTEL 65
           K++GTKL+I+SIIT +IPI +LG VS +TI  +M +Q+ +K+      A ++++ +  ++
Sbjct: 8   KRLGTKLIIYSIITALIPIVMLGAVSTDTINTEMTKQAQEKINDDLNTAESVVNLKLDKI 67

Query: 66  CTLAEYASYTQGVKTSIKTGNVDDLELRAETLKSASNADLVIFTGNGGSTIASSSGEGIT 125
            +L +Y    +     +K  +  +L+  A + K+ S  D V+F    G+ +A S+ + +T
Sbjct: 68  SSLNKYIISNEKTINILKNNDTKELKTLAISYKNTSAPDFVVFFDGQGNVVARSNSD-VT 126

Query: 126 LDSTILKVSKSSEKS-GFEKIP--EQTALKFSDA------DVTGTD-----------SAL 165
            D++   + K    S G+  I   ++ ++K+ +       D+ GTD           SA+
Sbjct: 127 GDNSYEDLFKKVVNSTGYTSIEVLDKDSIKYENVGELVNIDIKGTDDSIDYSDSVQDSAM 186

Query: 166 SIVVAYPIYDDAGTL-GYVAFIDVLNNDHTLVDSIKASTGDESTLFLENYRISTSVVSGN 224
           ++V   PIYD  G L G     D+LN D+++VD++K ++ D +T+FL+  R+ST+V    
Sbjct: 187 ALVSIEPIYDKNGKLLGAAMAADILNKDYSIVDTVKDASKDATTIFLDGVRVSTNVQDNG 246

Query: 225 SRAVGTTASDVVYNTVVKENTEFMGSANVVGQSFLTKYVPLKDSNGATIGMVFVGTPEAQ 284
            RA+GT  S  VYN VV +   + G A VV + +LT Y P+ DS+   IGM+FVGTPE++
Sbjct: 247 GRAIGTLVSKEVYNHVVLDGKTYYGRAFVVNEWYLTAYEPIYDSDNEIIGMLFVGTPESK 306

Query: 285 FTQLVNNARNNTIIIALFGLLIAVVISLVSSRSITKPINQLEDGVHKFGSGDYDHTINVK 344
           F  L  N RN T ++ L GLLIA+++S + +R I KP+ QL+ G     +G YD  + V 
Sbjct: 307 FLALQANVRNQTFVVGLIGLLIALIVSYLINRGIIKPLEQLKQGAEWVSNGRYDQKVIVD 366

Query: 345 TGDELEELANSFNKMAKDI 363
           + DE  ELA +FNKMA  I
Sbjct: 367 SDDEFGELAKAFNKMATQI 385